RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 SERINC3Q13530 473 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 IHHQ14623 411 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 LBRQ14739 615 aaKnown RBP15.43■□□□□ 0.06
CALD1-222ENST00000495522 PPM1LQ5SGD2 360 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 HECTD2Q5U5R9 776 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 PTAR1Q7Z6K3 402 aaPredicted RBP15.43■□□□□ 0.06
CALD1-222ENST00000495522 RNF135Q8IUD6 432 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 PGBD5Q8N414 524 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 OR6P1Q8NGX9 317 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 UCMAQ8WVF2 138 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 SERPINI1Q99574 410 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 TMEM161AQ9NX61 479 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 GTSE1Q9NYZ3 720 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 VWA8A3KMH1 1905 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 LOC285095A0A1B0GVY8 99 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 SOAT2O75908 522 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 CCDC166P0CW27 439 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 COL6A1P12109 1028 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 ARPP19P56211 112 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 PRAMEP78395 509 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 CAP1Q01518 475 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 TMEM198Q66K66 360 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 TMEM154Q6P9G4 183 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 EFCAB3Q8N7B9 438 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 HDAC10Q969S8 669 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 MAELQ96JY0 434 aaKnown RBP15.43■□□□□ 0.06
CALD1-222ENST00000495522 FAR2Q96K12 515 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 ZBTB26Q9HCK0 441 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 VWA7Q9Y334 891 aa15.43■□□□□ 0.06
CALD1-222ENST00000495522 TTC24A2A3L6 582 aaPredicted RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 NEMP2A6NFY4 417 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 A8MT66 165 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 TMEM233B4DJY2 109 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 IPO13O94829 963 aaKnown RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 ALDH1A1P00352 501 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 ATXN1LP0C7T5 689 aaKnown RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 CD1EP15812 388 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 ETFBP38117 255 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 PBX3P40426 434 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 MAPKAPK2P49137 400 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 YBEYP58557 167 aaPredicted RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 RING1Q06587 406 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 ACAP2Q15057 778 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 GSTA3Q16772 222 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 RASIP1Q5U651 963 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 CIR1Q86X95 450 aaPredicted RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 DSELQ8IZU8 1212 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 AFAP1L2Q8N4X5 818 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 SPDL1Q96EA4 605 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 UBXN10Q96LJ8 280 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 SH3GL3Q99963 347 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 VCXQ9H320 206 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 VCX3BQ9H321 246 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 EML4Q9HC35 981 aaKnown RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 RNF186Q9NXI6 227 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 STK39Q9UEW8 545 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 SLC27A5Q9Y2P5 690 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 MOXD2PA6NHM9 499 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 SDHDO14521 159 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 OR1E1P30953 314 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 ARSDP51689 593 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 ILF2Q12905 390 aaKnown RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 CDC16Q13042 620 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 LAMB3Q13751 1172 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 MGAT5BQ3V5L5 792 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 NAIF1Q69YI7 327 aaPredicted RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 SLC22A9Q8IVM8 553 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 ABI1Q8IZP0 508 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 CEP70Q8NHQ1 597 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 SPPL2BQ8TCT7 592 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 SPATA17Q96L03 361 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 GPR62Q9BZJ7 368 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 POLR1EQ9GZS1 481 aaKnown RBP15.42■□□□□ 0.06
CALD1-222ENST00000495522 COMMD8Q9NX08 183 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 ETAA1Q9NY74 926 aa15.42■□□□□ 0.06
CALD1-222ENST00000495522 MTMR11A4FU01 709 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 DPPA5A6NC42 116 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 LDB2O43679 373 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 PRAMEF11O60813 436 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 S1PR4O95977 384 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 HNRNPLP14866 589 aaKnown RBP eCLIP15.41■□□□□ 0.061e-8■□□□□ 11.3
CALD1-222ENST00000495522 KCNA5P22460 613 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 FGFR3P22607 806 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 ACVRL1P37023 503 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 SLC26A3P40879 764 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 SULT2A1Q06520 285 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 AP1ARQ63HQ0 302 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 BNC2Q6ZN30 1099 aaPredicted RBP15.41■□□□□ 0.06
CALD1-222ENST00000495522 KBTBD6Q86V97 674 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 APLFQ8IW19 511 aaPredicted RBP15.41■□□□□ 0.06
CALD1-222ENST00000495522 HIPK4Q8NE63 616 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 RCN3Q96D15 328 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 IFT43Q96FT9 208 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 FEM1CQ96JP0 617 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 MARK4Q96L34 752 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 B3GALT6Q96L58 329 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 NR1H4Q96RI1 486 aaPredicted RBP15.41■□□□□ 0.06
CALD1-222ENST00000495522 SEPT5Q99719 369 aaPredicted RBP15.41■□□□□ 0.06
CALD1-222ENST00000495522 SEMA3CQ99985 751 aa15.41■□□□□ 0.06
CALD1-222ENST00000495522 CYP4F12Q9HCS2 524 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms