RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TMEM259Q4ZIN3 620 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 NEK5Q6P3R8 708 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 KDELC2Q7Z4H8 507 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 PIH1D2Q8WWB5 315 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 SLC6A18Q96N87 628 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 WDR24Q96S15 920 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 MYOCQ99972 504 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 TM9SF3Q9HD45 589 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 FZD3Q9NPG1 666 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 VPS45Q9NRW7 570 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 SMARCAL1Q9NZC9 954 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 CA5BQ9Y2D0 317 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 CEP192Q8TEP8 1941 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 FRYLO94915 3013 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 A0A0U1RQS6 177 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 LIASO43766 372 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 CFIP05156 583 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 ZNF806P0C7X5 589 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 MSNP26038 577 aaKnown RBP19.55■□□□□ 0.72
HDAC4-212ENST00000495497 MMP12P39900 470 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 GDF10P55107 478 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 POLR2LP62875 67 aaKnown RBP19.55■□□□□ 0.72
HDAC4-212ENST00000495497 RPS21P63220 83 aaKnown RBP19.55■□□□□ 0.72
HDAC4-212ENST00000495497 ELP6Q0PNE2 266 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 PCSK7Q16549 785 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 TMEM52BQ4KMG9 183 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 TRIM61Q5EBN2 209 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 ANKRD20A2Q5SQ80 823 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 ANKRD20A1Q5TYW2 823 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 ANKRD20A3Q5VUR7 823 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 KIAA1161Q6NSJ0 714 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 ERAP2Q6P179 960 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 LAYNQ6UX15 382 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 FAM71DQ8N9W8 422 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 CCDC110Q8TBZ0 833 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 CXorf40AQ8TE69 158 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 COG1Q8WTW3 980 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 SERAC1Q96JX3 654 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 PBKQ96KB5 322 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 OSBPL9Q96SU4 736 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 VAT1Q99536 393 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 TMEM121Q9BTD3 319 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 SLC17A9Q9BYT1 436 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 B4GALT6Q9UBX8 382 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 PHTF1Q9UMS5 762 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 COQ6Q9Y2Z9 468 aa19.55■□□□□ 0.72
HDAC4-212ENST00000495497 TNRC6BQ9UPQ9 1833 aaKnown RBP19.55■□□□□ 0.72
HDAC4-212ENST00000495497 BCAT2O15382 392 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-212ENST00000495497 PMPCBO75439 489 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 PAK4O96013 591 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-212ENST00000495497 ALPIP09923 528 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 CSNK1EP49674 416 aaKnown RBP19.54■□□□□ 0.72
HDAC4-212ENST00000495497 SUOXP51687 545 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 IRX4P78413 519 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 CSRP2Q16527 193 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 DUOXA1Q1HG43 343 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 SETMARQ53H47 684 aaPredicted RBP19.54■□□□□ 0.72
HDAC4-212ENST00000495497 LPCAT1Q8NF37 534 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 TADA1Q96BN2 335 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 PCDH9Q9HC56 1237 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 KCND1Q9NSA2 647 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 RSPH14Q9UHP6 348 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 TRHDEQ9UKU6 1024 aa19.54■□□□□ 0.72
HDAC4-212ENST00000495497 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.54■□□□□ 0.72
HDAC4-212ENST00000495497 GON4LQ3T8J9 2241 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 A0A1B0GTW7 788 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 A0A1W2PQ67 120 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 GOLGA8CPA6NN73 597 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 ZNF185O15231 689 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 LRP3O75074 770 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 GNSP15586 552 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 DPP6P42658 865 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 LIG3P49916 1009 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 RALGDSQ12967 914 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 OASLQ15646 514 aaKnown RBP19.53■□□□□ 0.72
HDAC4-212ENST00000495497 SLC23A3Q6PIS1 610 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 DPPA4Q7L190 304 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 KIAA2013Q8IYS2 634 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 RASGEF1CQ8N431 466 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 CEP76Q8TAP6 659 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 SPOCK2Q92563 424 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 OXNAD1Q96HP4 312 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-212ENST00000495497 FCRL5Q96RD9 977 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 FERMT1Q9BQL6 677 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 GORASP1Q9BQQ3 440 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 C1QTNF2Q9BXJ5 285 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 AASDHPPTQ9NRN7 309 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 RXFP3Q9NSD7 469 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 SUSD2Q9UGT4 822 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 SNX12Q9UMY4 172 aa19.53■□□□□ 0.72
HDAC4-212ENST00000495497 OTOGLQ3ZCN5 2332 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 NPIPB15A6NHN6 443 aaPredicted RBP19.52■□□□□ 0.72
HDAC4-212ENST00000495497 KHNYNO15037 678 aaKnown RBP19.52■□□□□ 0.72
HDAC4-212ENST00000495497 FANCGO15287 622 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 RAD51BO15315 384 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 STK10O94804 968 aaKnown RBP19.52■□□□□ 0.72
HDAC4-212ENST00000495497 WNT1P04628 370 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 PSMB4P28070 264 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 HOXD12P35452 270 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 HNF1BP35680 557 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms