RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 OR7D4Q8NG98 312 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 FIBINQ8TAL6 211 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 GDAP1Q8TB36 358 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 RAB3IL1Q8TBN0 382 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 TCP10LQ8TDR4 215 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 DENND1AQ8TEH3 1009 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 MZB1Q8WU39 189 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 SCG3Q8WXD2 468 aaKnown RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 PTPRN2Q92932 1015 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 TADA1Q96BN2 335 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ZSWIM3Q96MP5 696 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 NELL2Q99435 816 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 RBBP8Q99708 897 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 APOL2Q9BQE5 337 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 BRD9Q9H8M2 597 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 PIH1D1Q9NWS0 290 aaKnown RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 HACD3Q9P035 362 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ANKRD6Q9Y2G4 727 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 MRPS17Q9Y2R5 130 aaKnown RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 MYOFQ9NZM1 2061 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 A0A0D9SEW6 157 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 C2orf81A6NN90 581 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 TCP11X1B4DZS4 312 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 ASMTLO95671 621 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 C1QAP02745 245 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 APOA4P06727 396 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 GJA1P17302 382 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 ALDH3A1P30838 453 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 CRHR1P34998 444 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 RPA3P35244 121 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-214ENST00000495485 CCNFP41002 786 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 MAGEA9P43362 315 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SCNN1BP51168 640 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 PLK1P53350 603 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 LIMK2P53671 638 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SEC24CP53992 1094 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SLC12A2P55011 1212 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 MAXP61244 160 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 AP1S1P61966 158 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 PRAMEP78395 509 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 RAD51Q06609 339 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 DMC1Q14565 340 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 LRRC14Q15048 493 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 E2F5Q15329 346 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 CCDC153Q494R4 210 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 TAF1BQ53T94 588 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-214ENST00000495485 TSTD2Q5T7W7 516 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 DENND5AQ6IQ26 1287 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 VITQ6UXI7 678 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 BMP8AQ7Z5Y6 402 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 GALNT7Q86SF2 657 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SDCCAG8Q86SQ7 713 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SUGP1Q8IWZ8 645 aaKnown RBP10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SLC25A41Q8N5S1 370 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 CCDC197Q8NCU1 140 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 ARRDC2Q8TBH0 407 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 BRSK1Q8TDC3 778 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 CSGALNACT1Q8TDX6 532 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 STYXQ8WUJ0 223 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 OSCP1Q8WVF1 389 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SPOCK2Q92563 424 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 RMDN1Q96DB5 314 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 MFSD3Q96ES6 412 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 ZNF317Q96PQ6 595 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SLC22A12Q96S37 553 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 FAM83CQ9BQN1 747 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 FEM1AQ9BSK4 669 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 C1QTNF1Q9BXJ1 281 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 COL25A1Q9BXS0 654 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-214ENST00000495485 PITPNM3Q9BZ71 974 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 OSBPL6Q9BZF3 934 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 IARS2Q9NSE4 1012 aaKnown RBP10.33□□□□□ -0.76
HDAC3-214ENST00000495485 TLK1Q9UKI8 766 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 SLC8A2Q9UPR5 921 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 TICRRQ7Z2Z1 1910 aa10.33□□□□□ -0.76
HDAC3-214ENST00000495485 ZNF318Q5VUA4 2279 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 A0A1W2PQ67 120 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 GOLGA8RI6L899 631 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 BIRC5O15392 142 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SLC7A4O43246 635 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SIN3BO75182 1162 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 VAPBO95292 243 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 PRAMEF12O95522 483 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 MMP2P08253 660 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 TROVE2P10155 538 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 COL6A2P12110 1019 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 CREB1P16220 341 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 DRD4P21917 467 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 SP100P23497 879 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 NFKBIAP25963 317 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 NMBRP28336 390 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 GDI1P31150 447 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 EIF2DP41214 584 aaKnown RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 CSNK1DP48730 415 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 NEK3P51956 506 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 NUBP1P53384 320 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 RPL26P61254 145 aaKnown RBP10.32□□□□□ -0.76
HDAC3-214ENST00000495485 RHOAP61586 193 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 GRM3Q14832 879 aa10.32□□□□□ -0.76
HDAC3-214ENST00000495485 ITPRIPL2Q3MIP1 535 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms