RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PNLIPP16233 465 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 ITGB6P18564 788 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 CD82P27701 267 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 ZFP36L1Q07352 338 aaKnown RBP14.37□□□□□ -0.11
VARS-228ENST00000495010 GRM3Q14832 879 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 INO80DQ53TQ3 878 aaPredicted RBP14.37□□□□□ -0.11
VARS-228ENST00000495010 COLEC12Q5KU26 742 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 FAM72AQ5TYM5 149 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 FAM72DQ6L9T8 149 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 FAM72BQ86X60 149 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 PAF1Q8N7H5 531 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 NETO2Q8NC67 525 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 GPR156Q8NFN8 814 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 HCAR2Q8TDS4 363 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 RBM15Q96T37 977 aaKnown RBP eCLIP14.37□□□□□ -0.11
VARS-228ENST00000495010 NDST4Q9H3R1 872 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 DPEP2Q9H4A9 486 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 LRIT1Q9P2V4 623 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 RNF215Q9Y6U7 377 aa14.37□□□□□ -0.11
VARS-228ENST00000495010 B4DGG1 531 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 ZW10O43264 779 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 PIGNO95427 931 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 MMEP08473 750 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 KELP23276 732 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 ETV5P41161 510 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 LIG3P49916 1009 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 ATP1A2P50993 1020 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 NOMO3P69849 1222 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 MTM1Q13496 603 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 UGP2Q16851 508 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 CCDC14Q49A88 953 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 MAP9Q49MG5 647 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 C14orf28Q4W4Y0 310 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 RAB6CQ53S08 254 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 CERCAMQ5T4B2 595 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 STRADAQ7RTN6 431 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 SPRED1Q7Z699 444 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 PHLDB2Q86SQ0 1253 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 NOP9Q86U38 636 aaKnown RBP14.36□□□□□ -0.11
VARS-228ENST00000495010 DNAAF5Q86Y56 855 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 IRF2BP1Q8IU81 584 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 OR56A4Q8NGH8 313 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 VOPP1Q96AW1 172 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 PDXPQ96GD0 296 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 RAB6CQ9H0N0 254 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 SLC25A18Q9H1K4 315 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 SUV39H2Q9H5I1 410 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 PCDH12Q9NPG4 1184 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 FOXJ2Q9P0K8 574 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 MOSPD1Q9UJG1 213 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 FHOD1Q9Y613 1164 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 DGKBQ9Y6T7 804 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 HECTD1Q9ULT8 2610 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 CHD5Q8TDI0 1954 aa14.36□□□□□ -0.11
VARS-228ENST00000495010 INSIG1O15503 277 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 EPHB2P29323 1055 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 YBEYP58557 167 aaPredicted RBP14.35□□□□□ -0.11
VARS-228ENST00000495010 CYP4F2P78329 520 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 BIRC2Q13490 618 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 KLHDC7AQ5VTJ3 777 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 OGFOD3Q6PK18 319 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 PIM3Q86V86 326 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 CCDC185Q8N715 623 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 KIAA1524Q8TCG1 905 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 GPT2Q8TD30 523 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 FAM172AQ8WUF8 416 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 EXOC2Q96KP1 924 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 MAGEB5Q9BZ81 275 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 GEMIN8Q9NWZ8 242 aaKnown RBP14.35□□□□□ -0.11
VARS-228ENST00000495010 KIAA1468Q9P260 1216 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 UBA2Q9UBT2 640 aaPredicted RBP14.35□□□□□ -0.11
VARS-228ENST00000495010 NAV2Q8IVL1 2488 aa14.35□□□□□ -0.11
VARS-228ENST00000495010 C9orf172C9J069 976 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 RASA4BC9J798 803 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 STMND1H3BQB6 276 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 RASA4O43374 803 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 NUDT21O43809 227 aaKnown RBP14.34□□□□□ -0.11
VARS-228ENST00000495010 PTPN9P43378 593 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 TLE1Q04724 770 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 SRSF1Q07955 248 aaKnown RBP eCLIP14.34□□□□□ -0.11
VARS-228ENST00000495010 AGERQ15109 404 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 AMZ1Q400G9 498 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 PARP15Q460N3 678 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 EFHC2Q5JST6 749 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 SPECC1LQ69YQ0 1117 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 BRAT1Q6PJG6 821 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 NYAP1Q6ZVC0 841 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 SLFN11Q7Z7L1 901 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 ZNF677Q86XU0 584 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 RTL3Q8N8U3 475 aaKnown RBP14.34□□□□□ -0.11
VARS-228ENST00000495010 JPH3Q8WXH2 748 aaPredicted RBP14.34□□□□□ -0.11
VARS-228ENST00000495010 ZNF641Q96N77 438 aaPredicted RBP14.34□□□□□ -0.11
VARS-228ENST00000495010 C11orf70Q9BRQ4 267 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 TUBGCP2Q9BSJ2 902 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 STK33Q9BYT3 514 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 B3GNT4Q9C0J1 378 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 SEMA6CQ9H3T2 930 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 CATSPERBQ9H7T0 1116 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 NEU3Q9UQ49 428 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms