RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	AGT	P01019	485 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	ATXN1L	P0C7T5	689 aa	Known RBP	13.63	□□□□□ -0.23
APTX-231	ENST00000494973	ACADM	P11310	421 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	WAS	P42768	502 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	MAGEA3	P43357	314 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	PSMD8	P48556	350 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	VSNL1	P62760	191 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	SATB1	Q01826	763 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	CST6	Q15828	149 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	SIRPB2	Q5JXA9	342 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	FBXL19	Q6PCT2	694 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.63	□□□□□ -0.23
APTX-231	ENST00000494973	TRIM67	Q6ZTA4	783 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	USP30	Q70CQ3	517 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	RELL1	Q8IUW5	271 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	RAVER1	Q8IY67	606 aa	Known RBP	13.63	□□□□□ -0.23
APTX-231	ENST00000494973	OR52K1	Q8NGK4	314 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	TTC25	Q96NG3	672 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	RANBP9	Q96S59	729 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	LYSMD1	Q96S90	227 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	FAM129B	Q96TA1	746 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	FOXQ1	Q9C009	403 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	MRM3	Q9HC36	420 aa	Known RBP	13.63	□□□□□ -0.23
APTX-231	ENST00000494973	MAGEE1	Q9HCI5	957 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	CD320	Q9NPF0	282 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	NCKAP1	Q9Y2A7	1128 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973	PPIL1	Q9Y3C6	166 aa		13.63	□□□□□ -0.23
APTX-231	ENST00000494973		A0A0J9YYE9	177 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973		A0A1W2PQF6	199 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TCRBV7S3A2	A0A539	114 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TTC24	A2A3L6	582 aa	Predicted RBP	13.62	□□□□□ -0.23
APTX-231	ENST00000494973	C2orf81	A6NN90	581 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	GOLGA8M	H3BSY2	632 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TTC4	O95801	387 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TRBC1	P01850	177 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	CTSL	P07711	333 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	GSTA2	P09210	222 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TSHR	P16473	764 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	ZNF30	P17039	623 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	ADRA1D	P25100	572 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	SLC8A1	P32418	973 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	CCR3	P51677	355 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	GALNT3	Q14435	633 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	SPARCL1	Q14515	664 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	QPCT	Q16769	361 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	UGP2	Q16851	508 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	CCDC38	Q502W7	563 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	PCID2	Q5JVF3	399 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	ZDHHC20	Q5W0Z9	365 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	MAMSTR	Q6ZN01	415 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	ZNF534	Q76KX8	674 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	ERN2	Q76MJ5	926 aa	Known RBP	13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TMPRSS6	Q8IU80	811 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	MMAA	Q8IVH4	418 aa	Known RBP	13.62	□□□□□ -0.23
APTX-231	ENST00000494973	SLC25A41	Q8N5S1	370 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TSTD1	Q8NFU3	115 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.62	□□□□□ -0.23
APTX-231	ENST00000494973	BRSK1	Q8TDC3	778 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	PIH1D2	Q8WWB5	315 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	SIPA1	Q96FS4	1042 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	SCRN2	Q96FV2	425 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	NECAB3	Q96P71	396 aa	Predicted RBP	13.62	□□□□□ -0.23
APTX-231	ENST00000494973	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.62	□□□□□ -0.23
APTX-231	ENST00000494973	PABPC3	Q9H361	631 aa	Known RBP	13.62	□□□□□ -0.23
APTX-231	ENST00000494973	MTG2	Q9H4K7	406 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	RAD18	Q9NS91	495 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	RIMKLB	Q9ULI2	386 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	FZD4	Q9ULV1	537 aa		13.62	□□□□□ -0.23
APTX-231	ENST00000494973	TCRBV21S2A2	A0A5A6	115 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	C16orf96	A6NNT2	1141 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973		H0Y858	1186 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	PSMD11	O00231	422 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	TP73	O15350	636 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	USP12	O75317	370 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	GJB3	O75712	270 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	PAPSS2	O95340	614 aa	Predicted RBP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	PRL	P01236	227 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	PGAM1	P18669	254 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	PAM	P19021	973 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	ECHS1	P30084	290 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	GK	P32189	559 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	CLCN5	P51795	746 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	COPA	P53621	1224 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	SESN2	P58004	480 aa	Predicted RBP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	RPS14	P62263	151 aa	Known RBP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	PDIA2	Q13087	525 aa	Known RBP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	ARHGEF7	Q14155	803 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	BBS9	Q3SYG4	887 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	SPDYC	Q5MJ68	293 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	SYCP2L	Q5T4T6	812 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	DENND5A	Q6IQ26	1287 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	CASC4	Q6P4E1	433 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973		Q6ZS52	159 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	PARS2	Q7L3T8	475 aa	Known RBP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	GLT6D1	Q7Z4J2	308 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	CAND1	Q86VP6	1230 aa	Known RBP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	CCDC25	Q86WR0	208 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	CNPY4	Q8N129	248 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	CAMKK1	Q8N5S9	505 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms