RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 IL10RBQ08334 325 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 IRF4Q15306 451 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 ELOCQ15369 112 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 CDKN3Q16667 212 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 CA9Q16790 459 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 PPP6R3Q5H9R7 873 aaPredicted RBP18.51■□□□□ 0.55
SNX8-209ENST00000494722 C6orf132Q5T0Z8 1188 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 ESRP1Q6NXG1 681 aaKnown RBP18.51■□□□□ 0.55
SNX8-209ENST00000494722 LVRNQ6Q4G3 990 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 EFL1Q7Z2Z2 1120 aaKnown RBP18.51■□□□□ 0.55
SNX8-209ENST00000494722 ZNF571Q7Z3V5 609 aaPredicted RBP18.51■□□□□ 0.55
SNX8-209ENST00000494722 SRLQ86TD4 932 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 RBFAQ8N0V3 343 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 ZNF653Q96CK0 615 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 KCTD15Q96SI1 283 aaPredicted RBP18.51■□□□□ 0.55
SNX8-209ENST00000494722 LRRC61Q9BV99 259 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 ZWILCHQ9H900 591 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 MBNL1Q9NR56 388 aaKnown RBP18.51■□□□□ 0.55
SNX8-209ENST00000494722 PCDHB1Q9Y5F3 818 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 RP1P56715 2156 aa18.51■□□□□ 0.55
SNX8-209ENST00000494722 IGSF10Q6WRI0 2623 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 GOLGA6L19H0YKK7 550 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 TCEA3O75764 348 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 DXOO77932 396 aaKnown RBP18.5■□□□□ 0.55
SNX8-209ENST00000494722 ALPIP09923 528 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 MYF5P13349 255 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 PCK1P35558 622 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 MMP12P39900 470 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 LSSP48449 732 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 BCL2L1Q07817 233 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 MTM1Q13496 603 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 WSCD2Q2TBF2 565 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 SOWAHCQ53LP3 525 aaPredicted RBP18.5■□□□□ 0.55
SNX8-209ENST00000494722 FIGNQ5HY92 759 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 TMCO4Q5TGY1 634 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 GUSBP11Q6P575 273 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 CAMK1DQ8IU85 385 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 ARFGAP1Q8N6T3 406 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 PAF1Q8N7H5 531 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 PEBP4Q96S96 227 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 CAAP1Q9H8G2 361 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 POLR1BQ9H9Y6 1135 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 DOLKQ9UPQ8 538 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 BZW2Q9Y6E2 419 aaKnown RBP18.5■□□□□ 0.55
SNX8-209ENST00000494722 PTPRQQ9UMZ3 2332 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 SHROOM3Q8TF72 1996 aa18.5■□□□□ 0.55
SNX8-209ENST00000494722 LOC400499M0QZD8 3231 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 EIF4E1BA6NMX2 242 aaKnown RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 H3BRJ5 948 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 DFFAO00273 331 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 BUB1BO60566 1050 aaPredicted RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 USP12O75317 370 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 LRCH4O75427 683 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 GCATO75600 419 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 RASGRP1O95267 797 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 SERPINC1P01008 464 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 CTSEP14091 401 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 TSHRP16473 764 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 LIG3P49916 1009 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 HK3P52790 923 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 PCBP4P57723 403 aaKnown RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 ERVPABLB-1P60509 514 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 AP1S1P61966 158 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 TPM4P67936 248 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 GABREP78334 506 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 COL9A2Q14055 689 aaPredicted RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 NFATC4Q14934 902 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 ISXQ2M1V0 245 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 RBM44Q6ZP01 1051 aaKnown RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 ARHGAP12Q8IWW6 846 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 TSEN2Q8NCE0 465 aaKnown RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 ZNF248Q8NDW4 579 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 ZNF599Q96NL3 588 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 UBL7Q96S82 380 aaPredicted RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 APOOQ9BUR5 198 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 ISCUQ9H1K1 167 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 TCEAL2Q9H3H9 227 aaPredicted RBP18.49■□□□□ 0.55
SNX8-209ENST00000494722 SEPT3Q9UH03 358 aa18.49■□□□□ 0.55
SNX8-209ENST00000494722 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.48■□□□□ 0.55
SNX8-209ENST00000494722 A0A1W2PQ67 120 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 DDX3XO00571 662 aaKnown RBP eCLIP18.48■□□□□ 0.557e-12■■□□□ 13.8
SNX8-209ENST00000494722 YY2O15391 372 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 NFKBIAP25963 317 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 ITPKBP27987 946 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 HSPA9P38646 679 aaKnown RBP18.48■□□□□ 0.55
SNX8-209ENST00000494722 ARL4AP40617 200 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 C1orf61Q13536 156 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 INPP5AQ14642 412 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 NR1I3Q14994 352 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 BOLA3Q53S33 107 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 IGF2-ASQ6U949 168 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 ENPP7Q6UWV6 458 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 ECHDC3Q96DC8 303 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 WDR92Q96MX6 357 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 PSKH2Q96QS6 385 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 PRORYQ9H606 182 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 CWC15Q9P013 229 aaKnown RBP18.48■□□□□ 0.55
SNX8-209ENST00000494722 COQ6Q9Y2Z9 468 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 LRP4O75096 1905 aa18.48■□□□□ 0.55
SNX8-209ENST00000494722 FASNP49327 2511 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms