RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 TSPAN4O14817 238 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 HSPA12AO43301 675 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 GALTP07902 379 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 IGHV4-30-4P0DP06 118 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 IRF1P10914 325 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 CLDN2P57739 230 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 DDR1Q08345 913 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 GRSF1Q12849 480 aaKnown RBP eCLIP5.32□□□□□ -1.56
NCL-210ENST00000494618 COASYQ13057 564 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 SF3B4Q15427 424 aaKnown RBP eCLIP5.32□□□□□ -1.562e-13■■■■■ 44.8
NCL-210ENST00000494618 CALCRLQ16602 461 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 HIST2H2ACQ16777 129 aaPredicted RBP5.32□□□□□ -1.56
NCL-210ENST00000494618 RHBDF2Q6PJF5 856 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 ZC3HC1Q86WB0 502 aaKnown RBP5.32□□□□□ -1.56
NCL-210ENST00000494618 PLD5Q8N7P1 536 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 SCCPDHQ8NBX0 429 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 HVCN1Q96D96 273 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 ZNF570Q96NI8 536 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 FUZQ9BT04 418 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 DDX31Q9H8H2 851 aaKnown RBP5.32□□□□□ -1.56
NCL-210ENST00000494618 CISD1Q9NZ45 108 aaKnown RBP5.32□□□□□ -1.56
NCL-210ENST00000494618 FAM96BQ9Y3D0 163 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 DOCK7Q96N67 2140 aa5.32□□□□□ -1.56
NCL-210ENST00000494618 ATXN2Q99700 1313 aaKnown RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 HOXC11O43248 304 aaPredicted RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 COX7A2P14406 83 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 XBP1P17861 261 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 PIGAP37287 484 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 EEF1A2Q05639 463 aaKnown RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 SNTA1Q13424 505 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 DHX34Q14147 1143 aaKnown RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 PGBD5Q8N414 524 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 ZCCHC9Q8N567 271 aaKnown RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 LILRB1Q8NHL6 650 aaPredicted RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 FBXL8Q96CD0 374 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 APOPT1Q96IL0 206 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 BBS4Q96RK4 519 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 TTYH1Q9H313 450 aaPredicted RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 RETREG1Q9H6L5 497 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 VEZTQ9HBM0 779 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 PLSCR4Q9NRQ2 329 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 SLC25A10Q9UBX3 287 aaPredicted RBP5.31□□□□□ -1.56
NCL-210ENST00000494618 SNX9Q9Y5X1 595 aa5.31□□□□□ -1.56
NCL-210ENST00000494618 A0A1B0GUV1 79 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 RRN3P2A6NIE6 340 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 TNPO2O14787 897 aaKnown RBP5.3□□□□□ -1.56
NCL-210ENST00000494618 ZIC3O60481 467 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 LDB3O75112 727 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 TACC1O75410 805 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 HEXAP06865 529 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 SNRNP70P08621 437 aaKnown RBP5.3□□□□□ -1.56
NCL-210ENST00000494618 ETFAP13804 333 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 STX2P32856 288 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 UFM1P61960 85 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 DLG1Q12959 904 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 PPP2R5BQ15173 497 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.3□□□□□ -1.562e-6■□□□□ 10.4
NCL-210ENST00000494618 NR2C2APQ86WQ0 139 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 ZNF114Q8NC26 417 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 ERGIC1Q969X5 290 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 ZNF385AQ96PM9 386 aaKnown RBP5.3□□□□□ -1.56
NCL-210ENST00000494618 VPS33BQ9H267 617 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 CTNNAL1Q9UBT7 734 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 MALT1Q9UDY8 824 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 SLCO3A1Q9UIG8 710 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 SLC13A4Q9UKG4 626 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 ICAM5Q9UMF0 924 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 CDC14AQ9UNH5 594 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 NOTCH4Q99466 2003 aa5.3□□□□□ -1.56
NCL-210ENST00000494618 TEX13CA0A0J9YWL9 993 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 MAGEA13PA6NCF6 341 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 TTC36A6NLP5 189 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 NCAM2O15394 837 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 KLK8O60259 260 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 MT-CYBP00156 380 aaPredicted RBP5.29□□□□□ -1.56
NCL-210ENST00000494618 HNRNPA1P09651 372 aaKnown RBP eCLIP5.29□□□□□ -1.56
NCL-210ENST00000494618 SSTR2P30874 369 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 PAFAH1B1P43034 410 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 ERVFC1-1P60608 527 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 TCTN1Q2MV58 587 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 PPP6R3Q5H9R7 873 aaPredicted RBP5.29□□□□□ -1.56
NCL-210ENST00000494618 FAM69BQ5VUD6 431 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 SMC5Q8IY18 1101 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 AGBL3Q8NEM8 1001 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 ZBTB10Q96DT7 871 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 KIF1BPQ96EK5 621 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 BICD1Q96G01 975 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 SCMH1Q96GD3 660 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 H2AFJQ9BTM1 129 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 BPIFA1Q9NP55 256 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 C20orf141Q9NUB4 165 aa5.29□□□□□ -1.56
NCL-210ENST00000494618 LRRFIP2Q9Y608 721 aaKnown RBP5.29□□□□□ -1.56
NCL-210ENST00000494618 TCF20Q9UGU0 1960 aaKnown RBP5.29□□□□□ -1.56
NCL-210ENST00000494618 SCN5AQ14524 2016 aa5.28□□□□□ -1.56
NCL-210ENST00000494618 SAA2-SAA4A0A096LPE2 208 aa5.28□□□□□ -1.56
NCL-210ENST00000494618 CPED1A4D0V7 1026 aa5.28□□□□□ -1.56
NCL-210ENST00000494618 SRRM3A6NNA2 597 aaPredicted RBP5.28□□□□□ -1.56
NCL-210ENST00000494618 BCAT2O15382 392 aaPredicted RBP5.28□□□□□ -1.56
NCL-210ENST00000494618 TIPRLO75663 272 aa5.28□□□□□ -1.56
NCL-210ENST00000494618 MMP2P08253 660 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms