RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 UGP2Q16851 508 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 DEFB133Q30KQ1 61 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 TMEM52BQ4KMG9 183 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 PPP6R3Q5H9R7 873 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 ESRP1Q6NXG1 681 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 PHACTR4Q8IZ21 702 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 TSEN2Q8NCE0 465 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 FNIP1Q8TF40 1166 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 TBATAQ96M53 351 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 CINPQ9BW66 212 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 ATP13A3Q9H7F0 1226 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 ZFYVE26Q68DK2 2539 aa13.51□□□□□ -0.25
CTDSP1-212ENST00000494067 DFFAO00273 331 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 TLX3O43711 291 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 GCATO75600 419 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 PEX11BO96011 259 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 CELA2BP08218 269 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 GM2AP17900 193 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 ARL4AP40617 200 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 CSNK1DP48730 415 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 ADKP55263 362 aaKnown RBP13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 BCL2L1Q07817 233 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 ACAP1Q15027 740 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 IRF4Q15306 451 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 ELOCQ15369 112 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 CDKN3Q16667 212 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 SMTNL2Q2TAL5 461 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 PRRT3Q5FWE3 981 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 FIGNQ5HY92 759 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 MACC1Q6ZN28 852 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 CAMK1DQ8IU85 385 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 FSTL5Q8N475 847 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 LZTR1Q8N653 840 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 WDR48Q8TAF3 677 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 NAT6Q93015 286 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 GRAMD1AQ96CP6 724 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 EDEM3Q9BZQ6 932 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 THAP2Q9H0W7 228 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 PCDHB1Q9Y5F3 818 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 APC2O95996 2303 aa13.5□□□□□ -0.25
CTDSP1-212ENST00000494067 GOLGA4Q13439 2230 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 A0A087X0T9 212 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 H3BRJ5 948 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 BRINP1O60477 761 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 USP12O75317 370 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 CSO75390 466 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 RASGRP1O95267 797 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 GYPCP04921 128 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 ALPIP09923 528 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 FAM228BP0C875 321 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 NFKBIAP25963 317 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 HCAR3P49019 387 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 SLC25A11Q02978 314 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 IL10RBQ08334 325 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 RALGDSQ12967 914 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 C1orf61Q13536 156 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 WSCD2Q2TBF2 565 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 TMCO4Q5TGY1 634 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 EFL1Q7Z2Z2 1120 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 SRLQ86TD4 932 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 PELI3Q8N2H9 469 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 BBS5Q8N3I7 341 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 SDR16C5Q8N3Y7 309 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 PGBD5Q8N414 524 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 SNIP1Q8TAD8 396 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 NSMCE1Q8WV22 266 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 ZNF578Q96N58 590 aaPredicted RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 CLPBQ9H078 707 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 SHROOM3Q8TF72 1996 aa13.49□□□□□ -0.25
CTDSP1-212ENST00000494067 SMG1Q96Q15 3661 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 A0A1W2PQ67 120 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 EME2A4GXA9 379 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 CFAP69A5D8W1 941 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 LMO7DNF2Z398 122 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 C6P13671 934 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 AMPD1P23109 780 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 MMP12P39900 470 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 NSUN2Q08J23 767 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 SLC10A7Q0GE19 358 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 PTPRRQ15256 657 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 TBC1D25Q3MII6 688 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 BOLA3Q53S33 107 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 C6orf132Q5T0Z8 1188 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 BROXQ5VW32 411 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 CDCP2Q5VXM1 449 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 GUSBP11Q6P575 273 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 LVRNQ6Q4G3 990 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 GKN2Q86XP6 184 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 HID1Q8IV36 788 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 CPLX3Q8WVH0 158 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 LRRC61Q9BV99 259 aa13.48□□□□□ -0.25
CTDSP1-212ENST00000494067 SEPT3Q9UH03 358 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms