RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CNPY1Q3B7I2 92 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 SFT2D3Q587I9 215 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 TECRLQ5HYJ1 363 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 AFMIDQ63HM1 303 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 NEPROQ6NW34 567 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 PRR23BQ6ZRT6 265 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 MRPL10Q7Z7H8 261 aaKnown RBP11.56□□□□□ -0.56
RFC4-214ENST00000494047 TAC4Q86UU9 113 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 FAM126BQ8IXS8 530 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 NUP93Q8N1F7 819 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 BBS5Q8N3I7 341 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 KDM1BQ8NB78 822 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 TNIP2Q8NFZ5 429 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 RCN3Q96D15 328 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 FUBP3Q96I24 572 aaKnown RBP eCLIP11.56□□□□□ -0.56
RFC4-214ENST00000494047 ELMO2Q96JJ3 720 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 NUF2Q9BZD4 464 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 MFSD1Q9H3U5 465 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 FBXO44Q9H4M3 255 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 CDHR5Q9HBB8 845 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 COMMD8Q9NX08 183 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 OSER1Q9NX31 292 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 TUBA8Q9NY65 449 aaPredicted RBP11.56□□□□□ -0.56
RFC4-214ENST00000494047 SLC17A6Q9P2U8 582 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 DNAH12Q6ZR08 3092 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 SHROOM3Q8TF72 1996 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 PTPRDP23468 1912 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 LTBP2Q14767 1821 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 AQP12BA6NM10 295 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 FAM72CH0Y354 149 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 M0QZQ0 153 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 DFFAO00273 331 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 DLX3O60479 287 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 MAFKO60675 156 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 DNAJA2O60884 412 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 TMCC1O94876 653 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 TIMP1P01033 207 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 EPOP01588 193 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 SNRPB2P08579 225 aaKnown RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 ZCCHC18P0CG32 403 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 ENO3P13929 434 aaPredicted RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 HLA-DPA1P20036 260 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 OGNP20774 298 aaKnown RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 EPHA3P29320 983 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 SLC7A1P30825 629 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 ARRB2P32121 409 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 SLC1A2P43004 574 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 NDUFV1P49821 464 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 SERPINH1P50454 418 aaKnown RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 KPNA1P52294 538 aaPredicted RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 THOP1P52888 689 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 IRF9Q00978 393 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 TMEM62Q0P6H9 643 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 INPP5AQ14642 412 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 LRIT3Q3SXY7 679 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 VWA5B1Q5TIE3 1220 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 FAM72AQ5TYM5 149 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 ZNF470Q6ECI4 717 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 FAM72DQ6L9T8 149 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 GPR153Q6NV75 609 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 RWDD4Q6NW29 188 aaKnown RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 MSANTD2Q6P1R3 559 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 CES3Q6UWW8 571 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 RANBP10Q6VN20 620 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 B3GNT6Q6ZMB0 384 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 TRIM67Q6ZTA4 783 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 FKBP9P1Q75LS8 142 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 FAM72BQ86X60 149 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 AQP12AQ8IXF9 295 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 UMODL1-AS1Q8N2C9 162 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 TMEM151AQ8N4L1 468 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 BHLHE22Q8NFJ8 381 aaPredicted RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 IPMKQ8NFU5 416 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 RHEBL1Q8TAI7 183 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 ZSCAN18Q8TBC5 510 aaPredicted RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 HM13Q8TCT9 377 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 KCTD4Q8WVF5 259 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 MYLPFQ96A32 169 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 ZUFSPQ96AP4 578 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 TRIM43Q96BQ3 446 aaPredicted RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 ATXN7L3BQ96GX2 97 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 GPR78Q96P69 363 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 UHRF1Q96T88 793 aaPredicted RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 FICDQ9BVA6 458 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 CEP41Q9BYV8 373 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 POMKQ9H5K3 350 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 GID8Q9NWU2 228 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 TBX21Q9UL17 535 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 NDUFAF1Q9Y375 327 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 COPG1Q9Y678 874 aaKnown RBP11.55□□□□□ -0.56
RFC4-214ENST00000494047 AP4B1Q9Y6B7 739 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 MIA3Q5JRA6 1907 aa11.55□□□□□ -0.56
RFC4-214ENST00000494047 ZNF701M0R085 212 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 PSMD12O00232 456 aaPredicted RBP11.54□□□□□ -0.56
RFC4-214ENST00000494047 CLDN5O00501 218 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 SDHDO14521 159 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 INPPL1O15357 1258 aa11.54□□□□□ -0.56
RFC4-214ENST00000494047 USP12O75317 370 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms