RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MAXP61244 160 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 SLC10A2Q12908 348 aaPredicted RBP22.78■■□□□ 1.24
SNIP1-203ENST00000493916 BNIP3Q12983 259 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 AGERQ15109 404 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 ALG1LQ6GMV1 187 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 C11orf63Q6NUN7 778 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 ZNF830Q96NB3 372 aaPredicted RBP22.78■■□□□ 1.24
SNIP1-203ENST00000493916 NT5MQ9NPB1 228 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 HAUS2Q9NVX0 235 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 TOR4AQ9NXH8 423 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 APOBEC2Q9Y235 224 aaKnown RBP22.78■■□□□ 1.24
SNIP1-203ENST00000493916 HYOU1Q9Y4L1 999 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 ALG6Q9Y672 507 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 ANKRD36A6QL64 1941 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 SPTY2D1-AS1A0A0U1RR47 76 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 DKK1O94907 266 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 IPO7O95373 1038 aaKnown RBP22.77■■□□□ 1.24
SNIP1-203ENST00000493916 PRKCGP05129 697 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 ZFXP17010 805 aaPredicted RBP22.77■■□□□ 1.24
SNIP1-203ENST00000493916 LIG3P49916 1009 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 RALGDSQ12967 914 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 DPPA4Q7L190 304 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 RAB44Q7Z6P3 723 aaPredicted RBP22.77■■□□□ 1.24
SNIP1-203ENST00000493916 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.77■■□□□ 1.24
SNIP1-203ENST00000493916 CALR3Q96L12 384 aaKnown RBP22.77■■□□□ 1.24
SNIP1-203ENST00000493916 POLR1EQ9GZS1 481 aaKnown RBP22.77■■□□□ 1.24
SNIP1-203ENST00000493916 IMPACTQ9P2X3 320 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 FTSJ1Q9UET6 329 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 TFR2Q9UP52 801 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 PCDHGC4Q9Y5F7 938 aa22.77■■□□□ 1.24
SNIP1-203ENST00000493916 CEP295Q9C0D2 2601 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 APOL1O14791 398 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 FZD2Q14332 565 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 TAZQ16635 292 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 ODF2Q5BJF6 829 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 RAD9BQ6WBX8 426 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 PARGQ86W56 976 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 PAF1Q8N7H5 531 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 ADAMTS14Q8WXS8 1223 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 MAK16Q9BXY0 300 aaKnown RBP22.76■■□□□ 1.23
SNIP1-203ENST00000493916 MBNL1Q9NR56 388 aaKnown RBP22.76■■□□□ 1.23
SNIP1-203ENST00000493916 COQ6Q9Y2Z9 468 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 SHROOM3Q8TF72 1996 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 CABIN1Q9Y6J0 2220 aa22.76■■□□□ 1.23
SNIP1-203ENST00000493916 BTNL10A8MVZ5 291 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 CPP00450 1065 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 ATXN1LP0C7T5 689 aaKnown RBP22.75■■□□□ 1.23
SNIP1-203ENST00000493916 CCNB1P14635 433 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 CES1P23141 567 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 YPEL5P62699 121 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 PPIDQ08752 370 aaKnown RBP22.75■■□□□ 1.23
SNIP1-203ENST00000493916 TRAF2Q12933 501 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 PDE1CQ14123 709 aaPredicted RBP22.75■■□□□ 1.23
SNIP1-203ENST00000493916 LRRC14Q15048 493 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 IRF4Q15306 451 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 MFSD7Q6UXD7 560 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 SLCO6A1Q86UG4 719 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 CCDC13Q8IYE1 715 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 RNF25Q96BH1 459 aaPredicted RBP22.75■■□□□ 1.23
SNIP1-203ENST00000493916 SEMA3CQ99985 751 aa22.75■■□□□ 1.23
SNIP1-203ENST00000493916 RBM22Q9NW64 420 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNIP1-203ENST00000493916 REXO2Q9Y3B8 237 aaKnown RBP22.75■■□□□ 1.23
SNIP1-203ENST00000493916 RCCD1A6NED2 376 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 SDC3O75056 442 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 PIAS2O75928 621 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 PGLSO95336 258 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 TOP3BO95985 862 aaKnown RBP22.74■■□□□ 1.23
SNIP1-203ENST00000493916 ELFN1P0C7U0 828 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 TNNT1P13805 278 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 NME1P15531 152 aaKnown RBP22.74■■□□□ 1.23
SNIP1-203ENST00000493916 DGKAP23743 735 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 NFKBIAP25963 317 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 CDKN2BP42772 138 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 SEMG2Q02383 582 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 PTK2BQ14289 1009 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 WSCD2Q2TBF2 565 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 TPRG1LQ5T0D9 272 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 LIPIQ6XZB0 460 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 RFX6Q8HWS3 928 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 TMEM139Q8IV31 216 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 EID2Q8N6I1 236 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 CCNYQ8ND76 341 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 OLFM3Q96PB7 478 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 LGMNQ99538 433 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 BAG1Q99933 345 aaPredicted RBP22.74■■□□□ 1.23
SNIP1-203ENST00000493916 SCNM1Q9BWG6 230 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 GOLPH3Q9H4A6 298 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 DNAJC28Q9NX36 388 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 B4GALT6Q9UBX8 382 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 SALL4Q9UJQ4 1053 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 PHTF1Q9UMS5 762 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 NEUROG3Q9Y4Z2 214 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 HEY1Q9Y5J3 304 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 SPEGQ15772 3267 aa22.74■■□□□ 1.23
SNIP1-203ENST00000493916 HYAL3O43820 417 aaPredicted RBP22.73■■□□□ 1.23
SNIP1-203ENST00000493916 LZTS3O60299 673 aaPredicted RBP22.73■■□□□ 1.23
SNIP1-203ENST00000493916 LDOC1O95751 146 aaPredicted RBP22.73■■□□□ 1.23
SNIP1-203ENST00000493916 CSF2P04141 144 aa22.73■■□□□ 1.23
SNIP1-203ENST00000493916 HNRNPKP61978 463 aaKnown RBP eCLIP22.73■■□□□ 1.23
SNIP1-203ENST00000493916 IFI35P80217 286 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms