RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 QPCTQ16769 361 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 ZNF805Q5CZA5 627 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 ZNF776Q68DI1 518 aaPredicted RBP19.5■□□□□ 0.71
USP39-218ENST00000493829 PARS2Q7L3T8 475 aaKnown RBP19.5■□□□□ 0.71
USP39-218ENST00000493829 ANKMY2Q8IV38 441 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 AGGF1Q8N302 714 aaeCLIP19.5■□□□□ 0.71
USP39-218ENST00000493829 BLOC1S5Q8TDH9 187 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 NELL2Q99435 816 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 SYBUQ9NX95 663 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 A8MX80 341 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 SMAPO00193 183 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 MID1O15344 667 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 FGF1P05230 155 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 FASTKD3Q14CZ7 662 aaKnown RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 CST6Q15828 149 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 CRY1Q16526 586 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 HSF5Q4G112 596 aaPredicted RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 CCDC38Q502W7 563 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 CASC4Q6P4E1 433 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 PDIK1LQ8N165 341 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 SYNPOQ8N3V7 929 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 TMIEQ8NEW7 156 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 PIH1D2Q8WWB5 315 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 ECHDC3Q96DC8 303 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 LRIG1Q96JA1 1093 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 SAYSD1Q9NPB0 183 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 DYRK4Q9NR20 520 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 RAB21Q9UL25 225 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 SIT1Q9Y3P8 196 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 ARIH1Q9Y4X5 557 aaPredicted RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 SPO11Q9Y5K1 396 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 C16orf96A6NNT2 1141 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 XPAP23025 273 aaPredicted RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 MCM3P25205 808 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 ABL2P42684 1182 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 RPS14P62263 151 aaKnown RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 CWF19L1Q69YN2 538 aaKnown RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 KIAA1324Q6UXG2 1013 aaKnown RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 CENPUQ71F23 418 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 HMGB4Q8WW32 186 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 HHIPQ96QV1 700 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 TRIM56Q9BRZ2 755 aaKnown RBP19.49■□□□□ 0.71
USP39-218ENST00000493829 FAM129AQ9BZQ8 928 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 CHMP2BQ9UQN3 213 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 MAD1L1Q9Y6D9 718 aa19.49■□□□□ 0.71
USP39-218ENST00000493829 ANKRD66B4E2M5 251 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 ITGB7P26010 798 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 GRIA4P48058 902 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 DNAJC21Q5F1R6 531 aaKnown RBP19.48■□□□□ 0.71
USP39-218ENST00000493829 BRAT1Q6PJG6 821 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 TMPRSS6Q8IU80 811 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 ZBED8Q8IZ13 594 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 GANCQ8TET4 914 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 PPP1R16AQ96I34 528 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 WDR83Q9BRX9 315 aaKnown RBP19.48■□□□□ 0.71
USP39-218ENST00000493829 CD248Q9HCU0 757 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 ITM2BQ9Y287 266 aa19.48■□□□□ 0.71
USP39-218ENST00000493829 CHURC1-FNTBB4DL54 471 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 PPFIA2O75334 1257 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 EPOP01588 193 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 MLNP12872 115 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 NDUFV2P19404 249 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 MAGEA3P43357 314 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 FAM46CQ5VWP2 391 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 CAPN12Q6ZSI9 719 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 TTC7BQ86TV6 843 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 AADATQ8N5Z0 425 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 FRMD8Q9BZ67 464 aaPredicted RBP19.47■□□□□ 0.71
USP39-218ENST00000493829 BFARQ9NZS9 450 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 BCCIPQ9P287 314 aaKnown RBP eCLIP19.47■□□□□ 0.71
USP39-218ENST00000493829 SERGEFQ9UGK8 458 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 PHTF1Q9UMS5 762 aa19.47■□□□□ 0.71
USP39-218ENST00000493829 A0A0J9YYE9 177 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 A0A1W2PP55 124 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 TSPAN11A1L157 253 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 NPIPB15A6NHN6 443 aaPredicted RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 UPK3BL1B0FP48 263 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 UPK3BL2E5RIL1 263 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 BUD23O43709 281 aaKnown RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 ADH1BP00325 375 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 TRBC1P01850 177 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 DNTTP04053 509 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 TIMP2P16035 220 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 HNF1BP35680 557 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 ELK3P41970 407 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 FAM193AP78312 1265 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 CNTN1Q12860 1018 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 MTAPQ13126 283 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 SMAD1Q15797 465 aaKnown RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 UGP2Q16851 508 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 ANO7Q6IWH7 933 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 FBXL19Q6PCT2 694 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 SYT13Q7L8C5 426 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 IGDCC3Q8IVU1 814 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 PGBD3Q8N328 593 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 CFAP36Q96G28 342 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 C9orf72Q96LT7 481 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 CHRDQ9H2X0 955 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 ARNT2Q9HBZ2 717 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 PCDH12Q9NPG4 1184 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms