RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GRIA4P48058 902 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 PSMD8P48556 350 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 NEK3P51956 506 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 COPAP53621 1224 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 RPS14P62263 151 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 GUCY2DQ02846 1103 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 CDH17Q12864 832 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 TRAF2Q12933 501 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 MTAPQ13126 283 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 KCNJ11Q14654 390 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 RNASEH2BQ5TBB1 312 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 KIAA1211LQ6NV74 962 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 ERAP2Q6P179 960 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 RANBP10Q6VN20 620 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 USP45Q70EL2 814 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 PRUNE1Q86TP1 453 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 MMAAQ8IVH4 418 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 FBXL6Q8N531 539 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 EIF1ADQ8N9N8 165 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 PDCD6IPQ8WUM4 868 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNX17-208ENST00000493711 CPT1BQ92523 772 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 RMDN1Q96DB5 314 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 MRGPRX2Q96LB1 330 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 KLHL32Q96NJ5 620 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 TRIB3Q96RU7 358 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 PABPC3Q9H361 631 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 ZDHHC4Q9NPG8 344 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 UBP1Q9NZI7 540 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 HACD3Q9P035 362 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 DLGAP2Q9P1A6 1054 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNX17-208ENST00000493711 EBF1Q9UH73 591 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 SNX24Q9Y343 169 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 PPIL1Q9Y3C6 166 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 PCDHB9Q9Y5E1 797 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 TTC24A2A3L6 582 aaPredicted RBP12.51□□□□□ -0.41
SNX17-208ENST00000493711 UPK3BL1B0FP48 263 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 UPK3BL2E5RIL1 263 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 PIGNO95427 931 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 CTSLP07711 333 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 RPL21P46778 160 aaKnown RBP12.51□□□□□ -0.41
SNX17-208ENST00000493711 NPY2RP49146 381 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 ELP6Q0PNE2 266 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 GAS6Q14393 721 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 PCSK7Q16549 785 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 DNAJC21Q5F1R6 531 aaKnown RBP12.51□□□□□ -0.41
SNX17-208ENST00000493711 HIBCHQ6NVY1 386 aaPredicted RBP12.51□□□□□ -0.41
SNX17-208ENST00000493711 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 FBXL19Q6PCT2 694 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 ERN2Q76MJ5 926 aaKnown RBP12.51□□□□□ -0.41
SNX17-208ENST00000493711 TAB3Q8N5C8 712 aaPredicted RBP12.51□□□□□ -0.41
SNX17-208ENST00000493711 NAT8LQ8N9F0 302 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 MRGPRX1Q96LB2 322 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 OMDQ99983 421 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 GORASP1Q9BQQ3 440 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 FICDQ9BVA6 458 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 TRIM31Q9BZY9 425 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 MKRN2Q9H000 416 aaKnown RBP12.51□□□□□ -0.41
SNX17-208ENST00000493711 DPH5Q9H2P9 285 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 TRABDQ9H4I3 376 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 EPB41L5Q9HCM4 733 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 FZD4Q9ULV1 537 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 CHKBQ9Y259 395 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 F5P12259 2224 aa12.51□□□□□ -0.41
SNX17-208ENST00000493711 CCDC163A0A0D9SF12 145 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 ANTXRLA6NF34 631 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 ANKRD66B4E2M5 251 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 F5H423 210 aaPredicted RBP12.5□□□□□ -0.41
SNX17-208ENST00000493711 LAMTOR5O43504 91 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 AP1G1O43747 822 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 PPFIA2O75334 1257 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 GJB3O75712 270 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 AGTP01019 485 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 PDGFBP01127 241 aaPredicted RBP12.5□□□□□ -0.41
SNX17-208ENST00000493711 PRLP01236 227 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 RHOXF2BP0C7M4 288 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 CYP2A6P11509 494 aaPredicted RBP12.5□□□□□ -0.41
SNX17-208ENST00000493711 GABRG2P18507 467 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 OXTRP30559 389 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 GKP32189 559 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 ITGA8P53708 1063 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 ARL4CP56559 192 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 PDE1BQ01064 536 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 SLC7A5Q01650 507 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 UGP2Q16851 508 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 LRRC8BQ6P9F7 803 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 KIAA1324Q6UXG2 1013 aaKnown RBP12.5□□□□□ -0.41
SNX17-208ENST00000493711 TTC7BQ86TV6 843 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 RAVER1Q8IY67 606 aaKnown RBP12.5□□□□□ -0.41
SNX17-208ENST00000493711 PDIK1LQ8N165 341 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 PGBD3Q8N328 593 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 LPCAT1Q8NF37 534 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 GANCQ8TET4 914 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 HMGB4Q8WW32 186 aa12.5□□□□□ -0.41
SNX17-208ENST00000493711 PIH1D2Q8WWB5 315 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms