RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 CYSLTR2Q9NS75 346 aa6.05□□□□□ -1.44
SMG7-208ENST00000493609 KRT84Q9NSB2 600 aa6.05□□□□□ -1.44
SMG7-208ENST00000493609 SRPRBQ9Y5M8 271 aaKnown RBP6.05□□□□□ -1.44
SMG7-208ENST00000493609 TDRD9Q8NDG6 1382 aaKnown RBP6.05□□□□□ -1.44
SMG7-208ENST00000493609 INAFM1C9JVW0 142 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 SEC14L5O43304 696 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 RGS14O43566 566 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 SEC14L2O76054 403 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 ETFAP13804 333 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 CHMP24386 653 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 PBX3P40426 434 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 RFX2P48378 723 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 GPS2Q13227 327 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 ERV3-1Q14264 604 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 ALG11Q2TAA5 492 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 COL28A1Q2UY09 1125 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 ZNF260Q3ZCT1 412 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 FNBP1LQ5T0N5 605 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 OTUD1Q5VV17 481 aaPredicted RBP6.04□□□□□ -1.44
SMG7-208ENST00000493609 PATL1Q86TB9 770 aaKnown RBP6.04□□□□□ -1.44
SMG7-208ENST00000493609 GTF3C6Q969F1 213 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 INTS12Q96CB8 462 aaKnown RBP6.04□□□□□ -1.44
SMG7-208ENST00000493609 PRKRIP1Q9H875 184 aaPredicted RBP6.04□□□□□ -1.44
SMG7-208ENST00000493609 CLK4Q9HAZ1 481 aaKnown RBP6.04□□□□□ -1.44
SMG7-208ENST00000493609 SCPEP1Q9HB40 452 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 MAGEE1Q9HCI5 957 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 BPIFA1Q9NP55 256 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 DDX4Q9NQI0 724 aaKnown RBP6.04□□□□□ -1.44
SMG7-208ENST00000493609 TMEM51Q9NW97 253 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 PTGDR2Q9Y5Y4 395 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 WRNQ14191 1432 aaPredicted RBP eCLIP6.04□□□□□ -1.44
SMG7-208ENST00000493609 PDS5BQ9NTI5 1447 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 SYNJ1O43426 1573 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 KIF21AQ7Z4S6 1674 aa6.04□□□□□ -1.44
SMG7-208ENST00000493609 FANCD2Q9BXW9 1451 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 CEP164Q9UPV0 1460 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 EEA1Q15075 1411 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 TTC36A6NLP5 189 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 USP17L23D6RBM5 183 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 F5H0A9 414 aaPredicted RBP6.03□□□□□ -1.44
SMG7-208ENST00000493609 TAF4O00268 1085 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 ITM2AO43736 263 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 MYF6P23409 242 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 SHMT1P34896 483 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 OLR1P78380 273 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 FGFBP1Q14512 234 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 SGO1Q5FBB7 561 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 DNTTIP2Q5QJE6 756 aaKnown RBP6.03□□□□□ -1.44
SMG7-208ENST00000493609 LRCH2Q5VUJ6 765 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 SNX30Q5VWJ9 437 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 HIST2H2BCQ6DN03 193 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 HIST2H2BDQ6DRA6 164 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 LCTLQ6UWM7 567 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 TECPR1Q7Z6L1 1165 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 PXKQ7Z7A4 578 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 SFTPA2Q8IWL1 248 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 ARRDC2Q8TBH0 407 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 SCARB1Q8WTV0 552 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 PSPC1Q8WXF1 523 aaKnown RBP6.03□□□□□ -1.44
SMG7-208ENST00000493609 ERGIC1Q969X5 290 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 CAMK1GQ96NX5 476 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 CHCHD6Q9BRQ6 235 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 SLC6A13Q9NSD5 602 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 BLOC1S4Q9NUP1 217 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 HAO1Q9UJM8 370 aa6.03□□□□□ -1.44
SMG7-208ENST00000493609 THOC2Q8NI27 1593 aaKnown RBP6.02□□□□□ -1.45
SMG7-208ENST00000493609 PI4KAP2A4QPH2 592 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 CD8B2A6NJW9 211 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 EIF3CLB5ME19 914 aaKnown RBP6.02□□□□□ -1.45
SMG7-208ENST00000493609 INO80B-WBP1J3KQ70 363 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 SPRY3O43610 288 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 NAGAP17050 411 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 AGAP20933 346 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 MAPK4P31152 587 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 BSGP35613 385 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 PIGAP37287 484 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 GABRB2P47870 512 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 SETQ01105 290 aaPredicted RBP6.02□□□□□ -1.45
SMG7-208ENST00000493609 CTTNQ14247 550 aaKnown RBP6.02□□□□□ -1.45
SMG7-208ENST00000493609 FRG1Q14331 258 aaKnown RBP6.02□□□□□ -1.45
SMG7-208ENST00000493609 MED22Q15528 200 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 TCTN1Q2MV58 587 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 FSCBQ5H9T9 825 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 DAB2IPQ5VWQ8 1189 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 AWAT2Q6E213 333 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 SLC35F3Q8IY50 421 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 NGEFQ8N5V2 710 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 OIT3Q8WWZ8 545 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 SMARCE1Q969G3 411 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 FBXL8Q96CD0 374 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 WDFY2Q96P53 400 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 KIF9Q9HAQ2 790 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 PLK2Q9NYY3 685 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 CISD1Q9NZ45 108 aaKnown RBP6.02□□□□□ -1.45
SMG7-208ENST00000493609 LIMA1Q9UHB6 759 aaKnown RBP6.02□□□□□ -1.45
SMG7-208ENST00000493609 NFE2L3Q9Y4A8 694 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 KCNE2Q9Y6J6 123 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 WDR62O43379 1518 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 CUX1P39880 1505 aa6.02□□□□□ -1.45
SMG7-208ENST00000493609 RUSC2Q8N2Y8 1516 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms