RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 UGT2B4P06133 528 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 HOXC6P09630 235 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 SLC35E2BP0CK96 405 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 IL7RP16871 459 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 JUNBP17275 347 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TPH1P17752 444 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 CHRM3P20309 590 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 ALDH4A1P30038 563 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TSPY1Q01534 308 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 ANO4Q32M45 955 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 MAP1SQ66K74 1059 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 PPP2R2DQ66LE6 453 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 IL31Q6EBC2 164 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 STYK1Q6J9G0 422 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 FAM45BPQ6NSW5 357 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 GADL1Q6ZQY3 521 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 SLC16A12Q6ZSM3 486 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 R3HCC1LQ7Z5L2 792 aaKnown RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 KCNMB4Q86W47 210 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 FUNDC1Q8IVP5 155 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TP53INP2Q8IXH6 220 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 KIAA2013Q8IYS2 634 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 ATP6V0D2Q8N8Y2 350 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 FAM45AQ8TCE6 357 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 SLC45A3Q96JT2 553 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 WDR12Q9GZL7 423 aaKnown RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 DNAI2Q9GZS0 605 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 LRRC40Q9H9A6 602 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 BPTFQ12830 3046 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TARM1B6A8C7 271 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TIMM44O43615 452 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 APOA4P06727 396 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 NCK1P16333 377 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 NR2C2P49116 596 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 ADARB1P78563 741 aaKnown RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 FPGSQ05932 587 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TUBA3CQ13748 450 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 IMPG1Q17R60 797 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 C8orf82Q6P1X6 216 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 PID1Q7Z2X4 250 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 ERO1BQ86YB8 467 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 EXOC8Q8IYI6 725 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 SPARTQ8N0X7 666 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TXNDC5Q8NBS9 432 aaKnown RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 TRPV3Q8NET8 790 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 PNPT1Q8TCS8 783 aaKnown RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 ZUFSPQ96AP4 578 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 ZNF668Q96K58 619 aaPredicted RBP11.77□□□□□ -0.53
HDAC4-210ENST00000493582 MYRFLQ96LU7 910 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 HOXD1Q9GZZ0 328 aa11.77□□□□□ -0.53
HDAC4-210ENST00000493582 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 PSME4Q14997 1843 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 MDM4O15151 490 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ABCB7O75027 752 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 BMP4P12644 408 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 KIAA0408Q6ZU52 694 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 TMEM135Q86UB9 458 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 SLC41A1Q8IVJ1 513 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ZNF567Q8N184 647 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 RDH11Q8TC12 318 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■■□□ 18
HDAC4-210ENST00000493582 SEPHS2Q99611 448 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 OSBPL10Q9BXB5 764 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 EPS8L2Q9H6S3 715 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 VANGL2Q9ULK5 521 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 AQP12BA6NM10 295 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 H0Y858 1186 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 TNNC2P02585 160 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ALBP02768 609 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 TSPAN8P19075 237 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 CCND2P30279 289 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ARCN1P48444 511 aaKnown RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 CAPSQ13938 189 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 VPS26BQ4G0F5 336 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 PMF1Q6P1K2 205 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 CDAN1Q8IWY9 1227 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 AQP12AQ8IXF9 295 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 LILRB4Q8NHJ6 448 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 HDAC11Q96DB2 347 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ZNF486Q96H40 463 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 KCTD15Q96SI1 283 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 TBCBQ99426 244 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ARPC5LQ9BPX5 153 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 YTHDF1Q9BYJ9 559 aaKnown RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 MRPL46Q9H2W6 279 aaKnown RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 POMKQ9H5K3 350 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 TLR9Q9NR96 1032 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 TSPAN16Q9UKR8 245 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 MTF2Q9Y483 593 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 MAGED1Q9Y5V3 778 aaPredicted RBP11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ANKRD12Q6UB98 2062 aa11.76□□□□□ -0.53
HDAC4-210ENST00000493582 ARPC2O15144 300 aa11.75□□□□□ -0.53
HDAC4-210ENST00000493582 MFSD11O43934 449 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms