RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SIGLEC6O43699 453 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 LRP4O75096 1905 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 CR2P20023 1033 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 MMP13P45452 471 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 LIG3P49916 1009 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 SEMG2Q02383 582 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 PTK2BQ14289 1009 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 PAFAH1B3Q15102 231 aaKnown RBP19.89■□□□□ 0.77
SMC4-222ENST00000490207 PROX2Q3B8N5 592 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 CCNI2Q6ZMN8 369 aaPredicted RBP19.89■□□□□ 0.77
SMC4-222ENST00000490207 MAP7D3Q8IWC1 876 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 RHOT2Q8IXI1 618 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 ASPMQ8IZT6 3477 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 PGBD5Q8N414 524 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 OR4C6Q8NH72 309 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 PCDH19Q8TAB3 1148 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 ZCCHC14Q8WYQ9 949 aaKnown RBP19.89■□□□□ 0.77
SMC4-222ENST00000490207 RFFLQ8WZ73 363 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 NSMCE3Q96MG7 304 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 NUDCD1Q96RS6 583 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 SCUBE2Q9NQ36 999 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 KMT2BQ9UMN6 2715 aaPredicted RBP19.89■□□□□ 0.77
SMC4-222ENST00000490207 USP24Q9UPU5 2620 aa19.89■□□□□ 0.77
SMC4-222ENST00000490207 TTC24A2A3L6 582 aaPredicted RBP19.88■□□□□ 0.77
SMC4-222ENST00000490207 TRIM38O00635 465 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 LZTS3O60299 673 aaPredicted RBP19.88■□□□□ 0.77
SMC4-222ENST00000490207 SOCS5O75159 536 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 CSF2P04141 144 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 ALPPL2P10696 532 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 GARSP41250 739 aaKnown RBP19.88■□□□□ 0.77
SMC4-222ENST00000490207 MAXP61244 160 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 YPEL5P62699 121 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 GALNT2Q10471 571 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 RALGDSQ12967 914 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 ZNF211Q13398 564 aaPredicted RBP19.88■□□□□ 0.77
SMC4-222ENST00000490207 LRRC14Q15048 493 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 MARC1Q5VT66 337 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 DPPA4Q7L190 304 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 LRRC49Q8IUZ0 686 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 KDF1Q8NAX2 398 aaPredicted RBP19.88■□□□□ 0.77
SMC4-222ENST00000490207 ZNF548Q8NEK5 533 aaPredicted RBP19.88■□□□□ 0.77
SMC4-222ENST00000490207 FAF2Q96CS3 445 aa19.88■□□□□ 0.77
SMC4-222ENST00000490207 TOR1BO14657 336 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 MTA2O94776 668 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 MAP3K6O95382 1288 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 CPP00450 1065 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 C1SP09871 688 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 ELFN1P0C7U0 828 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 CKMT2P17540 419 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 ARHGAP25P42331 645 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 POLR2LP62875 67 aaKnown RBP19.87■□□□□ 0.77
SMC4-222ENST00000490207 DAB2P98082 770 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 EIF2B5Q13144 721 aaKnown RBP19.87■□□□□ 0.77
SMC4-222ENST00000490207 SMAD1Q15797 465 aaKnown RBP19.87■□□□□ 0.77
SMC4-222ENST00000490207 RALGPS1Q5JS13 557 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 MACC1Q6ZN28 852 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 PDCD6IPQ8WUM4 868 aaKnown RBP19.87■□□□□ 0.77
SMC4-222ENST00000490207 NT5MQ9NPB1 228 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 NLGN3Q9NZ94 848 aa19.87■□□□□ 0.77
SMC4-222ENST00000490207 WDFY3Q8IZQ1 3526 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 A0A1W2PQ67 120 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 CFAP69A5D8W1 941 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 NEMP2A6NFY4 417 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 HTRA2O43464 458 aaPredicted RBP19.86■□□□□ 0.77
SMC4-222ENST00000490207 GIMD1P0DJR0 217 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 CDK4P11802 303 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 JUNDP17535 347 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 TRAF2Q12933 501 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 AGERQ15109 404 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 IFI16Q16666 785 aaKnown RBP19.86■□□□□ 0.77
SMC4-222ENST00000490207 WSCD2Q2TBF2 565 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 TIGD7Q6NT04 549 aaPredicted RBP19.86■□□□□ 0.77
SMC4-222ENST00000490207 PQLC3Q8N755 202 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 TC2NQ8N9U0 490 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 BTN2A2Q8WVV5 523 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 ANP32EQ9BTT0 268 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 NOD2Q9HC29 1040 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 APOBEC3BQ9UH17 382 aaKnown RBP19.86■□□□□ 0.77
SMC4-222ENST00000490207 KLF15Q9UIH9 416 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 INTUQ9ULD6 942 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 ZMIZ1Q9ULJ6 1067 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 PCDHGC4Q9Y5F7 938 aa19.86■□□□□ 0.77
SMC4-222ENST00000490207 IGF2RP11717 2491 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 LRRD1A4D1F6 860 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 FAM149AA5PLN7 773 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 SCAMP1O15126 338 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 AQP9O43315 295 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 NEBLO76041 1014 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 PCCBP05166 539 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 KDELR1P24390 212 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 ACP1P24666 158 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 ILKQ13418 452 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 LIPIQ6XZB0 460 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 MARCH9Q86YJ5 346 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 PHACTR4Q8IZ21 702 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 RBFAQ8N0V3 343 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 TEX26Q8N6G2 289 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 SPOCK2Q92563 424 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 RAPGEF5Q92565 580 aa19.85■□□□□ 0.77
SMC4-222ENST00000490207 DUSP23Q9BVJ7 150 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms