RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PSMD11O00231 422 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 KIF5CO60282 957 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 FZD6O60353 706 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 DFNA5O60443 496 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 CFIP05156 583 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 RBP3P10745 1247 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 PTPN3P26045 913 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 MAOBP27338 520 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 ATP5OP48047 213 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 EIF3EP60228 445 aaKnown RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 DSC2Q02487 901 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 ITKQ08881 620 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 WASHC5Q12768 1159 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 TRAF2Q12933 501 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 SGCGQ13326 291 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 ZNF211Q13398 564 aaPredicted RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 SF3A2Q15428 464 aaKnown RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 AASDHQ4L235 1098 aaPredicted RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 ZC3H18Q86VM9 953 aaKnown RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 ZSWIM9Q86XI8 627 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 DCP2Q8IU60 420 aaKnown RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 MFSD2AQ8NA29 543 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 TMEM145Q8NBT3 493 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 NETO1Q8TDF5 533 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 SCRN2Q96FV2 425 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 SRPK1Q96SB4 655 aaKnown RBP11.15□□□□□ -0.62
CPSF7-212ENST00000489728 HERPUD2Q9BSE4 406 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 EDEM2Q9BV94 578 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 TLR10Q9BXR5 811 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 ADGRE3Q9BY15 652 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 SLC17A9Q9BYT1 436 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 GLOD4Q9HC38 313 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 KCND1Q9NSA2 647 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 SEPT10Q9P0V9 454 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 TTLL3Q9Y4R7 772 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 PCDHB9Q9Y5E1 797 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 PCDHGC4Q9Y5F7 938 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 RAI2Q9Y5P3 530 aa11.15□□□□□ -0.62
CPSF7-212ENST00000489728 PLXNA2O75051 1894 aa11.15□□□□□ -0.63
CPSF7-212ENST00000489728 A0A1W2PR77 199 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 KCNK3O14649 394 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 OPHN1O60890 802 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 GJB3O75712 270 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 TM7SF2O76062 418 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 CER1O95813 267 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 MMP2P08253 660 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 CYP2A6P11509 494 aaPredicted RBP11.14□□□□□ -0.63
CPSF7-212ENST00000489728 ENGP17813 658 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 CD38P28907 300 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 IRX4P78413 519 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 SKOR1P84550 965 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 NIPAL4Q0D2K0 466 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 STAT4Q14765 748 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 LLGL1Q15334 1064 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 SEL1L3Q68CR1 1132 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 ITPRIPL1Q6GPH6 555 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 AADACL2Q6P093 401 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 KYAT3Q6YP21 454 aaKnown RBP11.14□□□□□ -0.63
CPSF7-212ENST00000489728 ADAT2Q7Z6V5 191 aaKnown RBP11.14□□□□□ -0.63
CPSF7-212ENST00000489728 SLC13A5Q86YT5 568 aaPredicted RBP11.14□□□□□ -0.63
CPSF7-212ENST00000489728 KIAA2013Q8IYS2 634 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 OXR1Q8N573 874 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 SLC35B2Q8TB61 432 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 NSMCE3Q96MG7 304 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 SLC6A18Q96N87 628 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 AGAP3Q96P47 875 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 FCRL5Q96RD9 977 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 LYSMD1Q96S90 227 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 EBF2Q9HAK2 575 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 PCDH9Q9HC56 1237 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 AASDHPPTQ9NRN7 309 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 KLHL8Q9P2G9 620 aaPredicted RBP11.14□□□□□ -0.63
CPSF7-212ENST00000489728 ITM2BQ9Y287 266 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 HS3ST3A1Q9Y663 406 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 LAMA1P25391 3075 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 PI4KAP42356 2102 aa11.14□□□□□ -0.63
CPSF7-212ENST00000489728 SDK1Q7Z5N4 2213 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 TRPM6Q9BX84 2022 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 A0A0J9YYE9 177 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 IGLON5A6NGN9 336 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 CAPN8A6NHC0 703 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 A6NNZ2 444 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 PATE3B3GLJ2 98 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 CES2O00748 559 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 YKT6O15498 198 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ANXA9O76027 345 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 EPOP01588 193 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 TRBC1P01850 177 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ELFN1P0C7U0 828 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ZNF883P0CG24 379 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 C6P13671 934 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ZNF30P17039 623 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 RBL1P28749 1068 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 MAT2AP31153 395 aaKnown RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 VIPR1P32241 457 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 CD86P42081 329 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 ATXN3P54252 364 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-212ENST00000489728 EPHB1P54762 984 aa11.13□□□□□ -0.63
CPSF7-212ENST00000489728 C21orf59P57076 290 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms