RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 PAMP19021 973 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 SERPINA4P29622 427 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 RECQLP46063 649 aaPredicted RBP21.79■■□□□ 1.08
SMC4-221ENST00000489573 ST8SIA6P61647 398 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 RAD51Q06609 339 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 TSTD2Q5T7W7 516 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 DPY19L3Q6ZPD9 716 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 MARK2Q7KZI7 788 aaKnown RBP21.79■■□□□ 1.08
SMC4-221ENST00000489573 SLC26A11Q86WA9 606 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 DEFB123Q8N688 67 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 FRS2Q8WU20 508 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 CDX2Q99626 313 aaPredicted RBP21.79■■□□□ 1.08
SMC4-221ENST00000489573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMC4-221ENST00000489573 PCDHB9Q9Y5E1 797 aa21.79■■□□□ 1.08
SMC4-221ENST00000489573 MROH6A6NGR9 719 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 TTC34A8MYJ7 566 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 ANKRD66B4E2M5 251 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 C2CD4DB7Z1M9 353 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 POP4O95707 220 aaKnown RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 PRKCGP05129 697 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 ERVK-10P10266 1014 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 GKP32189 559 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 RPL26P61254 145 aaKnown RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 MAGOHP61326 146 aaKnown RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 QPCTQ16769 361 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 PREPLQ4J6C6 727 aaPredicted RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 NAIF1Q69YI7 327 aaPredicted RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 GPR153Q6NV75 609 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 ESRP1Q6NXG1 681 aaKnown RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 KCNMB4Q86W47 210 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 CYP4X1Q8N118 509 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 BRSK1Q8TDC3 778 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 CPEB1Q9BZB8 566 aaKnown RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 C20orf96Q9NUD7 363 aaPredicted RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 IL1RAPL1Q9NZN1 696 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 RPL26L1Q9UNX3 145 aaKnown RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 WASH3PC4AMC7 463 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 LDB2O43679 373 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 PIRTP0C851 137 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 GRIA4P48058 902 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 EPHB1P54762 984 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 GRM3Q14832 879 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 PDPK2PQ6A1A2 396 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 KIAA0930Q6ICG6 404 aaPredicted RBP21.78■■□□□ 1.08
SMC4-221ENST00000489573 OR2A12Q8NGT7 310 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 CSGALNACT1Q8TDX6 532 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 CHFRQ96EP1 664 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 ZDHHC6Q9H6R6 413 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 ZFATQ9P243 1243 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 SLC2A6Q9UGQ3 507 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 ZNF180Q9UJW8 692 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 PLA2G4CQ9UP65 541 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 SPO11Q9Y5K1 396 aa21.78■■□□□ 1.08
SMC4-221ENST00000489573 TBC1D3BA6NDS4 549 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 POLR3GO15318 223 aaPredicted RBP21.77■■□□□ 1.08
SMC4-221ENST00000489573 SMAD1Q15797 465 aaKnown RBP21.77■■□□□ 1.08
SMC4-221ENST00000489573 CNGA3Q16281 694 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 KDM1BQ8NB78 822 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 UCMAQ8WVF2 138 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 PIH1D2Q8WWB5 315 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 PEX13Q92968 403 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 VOPP1Q96AW1 172 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 RIMKLBQ9ULI2 386 aa21.77■■□□□ 1.08
SMC4-221ENST00000489573 EYSQ5T1H1 3165 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 CRTAMO95727 393 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 FOSL2P15408 326 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 AAK1Q2M2I8 961 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 FNDC3BQ53EP0 1204 aaKnown RBP21.76■■□□□ 1.07
SMC4-221ENST00000489573 GLT6D1Q7Z4J2 308 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 PAF1Q8N7H5 531 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 CHST14Q8NCH0 376 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 FAM76AQ8TAV0 307 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 HACD3Q9P035 362 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 ARL5AQ9Y689 179 aa21.76■■□□□ 1.07
SMC4-221ENST00000489573 ANKRD36A6QL64 1941 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 IQANK1A0A1B0GTG1 560 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 UGT1A9O60656 530 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 KAT7O95251 611 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 APODP05090 189 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 SLC8A1P32418 973 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 GRIA2P42262 883 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 ARCN1P48444 511 aaKnown RBP21.75■■□□□ 1.07
SMC4-221ENST00000489573 TAF1AQ15573 450 aaPredicted RBP21.75■■□□□ 1.07
SMC4-221ENST00000489573 HSP90AA5PQ58FG0 334 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 OR13J1Q8NGT2 312 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 ZNF641Q96N77 438 aaPredicted RBP21.75■■□□□ 1.07
SMC4-221ENST00000489573 HEPHQ9BQS7 1158 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 SUV39H2Q9H5I1 410 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 UGT1A7Q9HAW7 530 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 UGT1A10Q9HAW8 530 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 UGT1A8Q9HAW9 530 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 SLC17A6Q9P2U8 582 aa21.75■■□□□ 1.07
SMC4-221ENST00000489573 FAM155BO75949 473 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 VAPBO95292 243 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 KRT15P19012 456 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 NR1D1P20393 614 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 ARNTP27540 789 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 HPDP32754 393 aaPredicted RBP21.74■■□□□ 1.07
SMC4-221ENST00000489573 SERPINB9P50453 376 aa21.74■■□□□ 1.07
SMC4-221ENST00000489573 TEDDM1Q5T9Z0 273 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms