RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 DCP2Q8IU60 420 aaKnown RBP17.47■□□□□ 0.39
MDC1-206ENST00000489540 DENND6BQ8NEG7 585 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 UBE2Q2Q8WVN8 375 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 P3H4Q92791 437 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 ELF4Q99607 663 aaPredicted RBP17.47■□□□□ 0.39
MDC1-206ENST00000489540 TM7SF3Q9NS93 570 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 TRIM10Q9UDY6 481 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 EFR3BQ9Y2G0 817 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 FNDC3AQ9Y2H6 1198 aaKnown RBP17.47■□□□□ 0.39
MDC1-206ENST00000489540 NYNRINQ9P2P1 1898 aaKnown RBP17.47■□□□□ 0.39
MDC1-206ENST00000489540 CACNA1EQ15878 2313 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 H0Y8X5 98 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 KCNK1O00180 336 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 KCNK3O14649 394 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 KRT86O43790 486 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 PEX5P50542 639 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 FAM193AP78312 1265 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 ABI3BPQ7Z7G0 1075 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 PIP4P1Q86T03 277 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 OXR1Q8N573 874 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 PDCD6IPQ8WUM4 868 aaKnown RBP17.47■□□□□ 0.39
MDC1-206ENST00000489540 LRRN4Q8WUT4 740 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 IL12RB2Q99665 862 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 MYOCQ99972 504 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 WRAP53Q9BUR4 548 aaKnown RBP17.47■□□□□ 0.39
MDC1-206ENST00000489540 FZD3Q9NPG1 666 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 PHTF1Q9UMS5 762 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 CA5BQ9Y2D0 317 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 PCDHB9Q9Y5E1 797 aa17.47■□□□□ 0.39
MDC1-206ENST00000489540 SPTBN4Q9H254 2564 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 A6NNZ2 444 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 MIF4GDA9UHW6 222 aaKnown RBP17.46■□□□□ 0.39
MDC1-206ENST00000489540 FPGTO14772 594 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 YKT6O15498 198 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 KCNK5O95279 499 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 THEGLP0DJG4 465 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 CEACAM1P13688 526 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 CA4P22748 312 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 MMP12P39900 470 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 CCT8P50990 548 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 CLDN2P57739 230 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 LLGL1Q15334 1064 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 PPM1JQ5JR12 505 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 ARMC12Q5T9G4 340 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 DBX2Q6ZNG2 339 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 BBS12Q6ZW61 710 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 NDUFAF2Q8N183 169 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 UBL4BQ8N7F7 174 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 CENPTQ96BT3 561 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 BMFQ96LC9 184 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 KLF6Q99612 283 aaPredicted RBP17.46■□□□□ 0.39
MDC1-206ENST00000489540 SAE1Q9UBE0 346 aaPredicted RBP17.46■□□□□ 0.39
MDC1-206ENST00000489540 TTLL3Q9Y4R7 772 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 RAI2Q9Y5P3 530 aa17.46■□□□□ 0.39
MDC1-206ENST00000489540 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.38
MDC1-206ENST00000489540 A0A1B0GTQ1 180 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 RAD51BO15315 384 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 MTSS1O43312 755 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 PCDHGA12O60330 932 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 PGLSO95336 258 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 CPP00450 1065 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 PRKCGP05129 697 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 HLA-DQB2P05538 268 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 PTPN7P35236 360 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 RABIFP47224 123 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 RXRGP48443 463 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 ARRB1P49407 418 aaPredicted RBP17.45■□□□□ 0.38
MDC1-206ENST00000489540 LIG3P49916 1009 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 DSC2Q02487 901 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 ADCY2Q08462 1091 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 TRAF2Q12933 501 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 KYAT3Q6YP21 454 aaKnown RBP17.45■□□□□ 0.38
MDC1-206ENST00000489540 GCNT7Q6ZNI0 430 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 Q6ZSR6 202 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 DPPA4Q7L190 304 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 SPATS2Q86XZ4 545 aaKnown RBP17.45■□□□□ 0.38
MDC1-206ENST00000489540 ARRDC2Q8TBH0 407 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 TFB1MQ8WVM0 346 aaKnown RBP17.45■□□□□ 0.38
MDC1-206ENST00000489540 HEMGNQ9BXL5 484 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 GUCA1BQ9UMX6 200 aa17.45■□□□□ 0.38
MDC1-206ENST00000489540 APOC4-APOC2K7ER74 178 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 TOR1BO14657 336 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 SH3BP5O60239 455 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 LZTS3O60299 673 aaPredicted RBP17.44■□□□□ 0.38
MDC1-206ENST00000489540 APOC2P02655 101 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 CCDC175P0C221 793 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 C6P13671 934 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 NOVA1P51513 510 aaKnown RBP17.44■□□□□ 0.38
MDC1-206ENST00000489540 FOXK2Q01167 660 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 ZBTB17Q13105 803 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 AGERQ15109 404 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 PRKD1Q15139 912 aaPredicted RBP17.44■□□□□ 0.38
MDC1-206ENST00000489540 TEX44Q53QW1 395 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 PRAMEF14Q5SWL7 426 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 CCDC181Q5TID7 509 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 ZNF662Q6ZS27 426 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 CNTD1Q8N815 330 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 OR13H1Q8NG92 308 aa17.44■□□□□ 0.38
MDC1-206ENST00000489540 ALG3Q92685 438 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms