RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ENPP7Q6UWV6 458 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 INTS8Q75QN2 995 aaKnown RBP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 FAM186BQ8IYM0 893 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 GRAMD1CQ8IYS0 662 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 UBR7Q8N806 425 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 IQUBQ8NA54 791 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 FBXL13Q8NEE6 735 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 FAM46DQ8NEK8 389 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 UBE2Q2Q8WVN8 375 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 PDXPQ96GD0 296 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 HSFY1Q96LI6 401 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 RBM15Q96T37 977 aaKnown RBP eCLIP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 HEPHQ9BQS7 1158 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 TLK1Q9UKI8 766 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 KCTD3Q9Y597 815 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 MORC2Q9Y6X9 1032 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-212ENST00000489378 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
SSBP1-212ENST00000489378 SVILO95425 2214 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 SYNJ2BP-COX16A0A087WUM0 186 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 FIGNL2A6NMB9 653 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 NUDT21O43809 227 aaKnown RBP9.27□□□□□ -0.93
SSBP1-212ENST00000489378 CLDN11O75508 207 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 RHOCP08134 193 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 KRT13P13646 458 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 ITIH2P19823 946 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 NR2F2P24468 414 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 MAP4P27816 1152 aaKnown RBP9.27□□□□□ -0.93
SSBP1-212ENST00000489378 CD1CP29017 333 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 ALDH4A1P30038 563 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 GTF2H1P32780 548 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 MXI1P50539 228 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 MAZP56270 477 aaKnown RBP9.27□□□□□ -0.93
SSBP1-212ENST00000489378 MC1RQ01726 317 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 NFATC4Q14934 902 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 NADK2Q4G0N4 442 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 ALFQ53S48 1182 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 CARD16Q5EG05 197 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 DCAF12Q5T6F0 453 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 SPECC1LQ69YQ0 1117 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 BEND5Q7L4P6 421 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 TAF8Q7Z7C8 310 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 NRSN1Q8IZ57 195 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 DCAF4L2Q8NA75 395 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 AGBL5Q8NDL9 886 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 CCDC112Q8NEF3 446 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 OR6K2Q8NGY2 324 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 NANOS1Q8WY41 292 aaKnown RBP9.27□□□□□ -0.93
SSBP1-212ENST00000489378 RAB7BQ96AH8 199 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 VOPP1Q96AW1 172 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 ASPSCR1Q9BZE9 553 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 ZDHHC6Q9H6R6 413 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 COX16Q9P0S2 106 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 KLQ9UEF7 1012 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 SLC12A6Q9UHW9 1150 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 KIAA1257Q9ULG3 409 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 ACTL7AQ9Y615 435 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 HS3ST4Q9Y661 456 aa9.27□□□□□ -0.93
SSBP1-212ENST00000489378 TOR1BO14657 336 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 AREL1O15033 823 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 RFPL1O75677 317 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 TM7SF2O76062 418 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 SORBS2O94875 1100 aaKnown RBP9.26□□□□□ -0.93
SSBP1-212ENST00000489378 FURINP09958 794 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 F8A1P23610 371 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 CSTF2P33240 577 aaKnown RBP eCLIP9.26□□□□□ -0.93
SSBP1-212ENST00000489378 PEX5P50542 639 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 COPB1P53618 953 aaKnown RBP9.26□□□□□ -0.93
SSBP1-212ENST00000489378 LIMK2P53671 638 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 CDH4P55283 916 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 TAF5Q15542 800 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 CNGA2Q16280 664 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 KLHL40Q2TBA0 621 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 WSCD2Q2TBF2 565 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
SSBP1-212ENST00000489378 TMCO4Q5TGY1 634 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 NKAIN2Q5VXU1 208 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 FOXR2Q6PJQ5 311 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 SHC4Q6S5L8 630 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 TMEM135Q86UB9 458 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 FAM129CQ86XR2 697 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 BMPERQ8N8U9 685 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 OR7D4Q8NG98 312 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 CCL4L1Q8NHW4 92 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 OR1E3Q8WZA6 343 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 RTP4Q96DX8 246 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 CTRCQ99895 268 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 EFHD1Q9BUP0 239 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 WRAP53Q9BUR4 548 aaKnown RBP9.26□□□□□ -0.93
SSBP1-212ENST00000489378 UNKQ9C0B0 810 aaKnown RBP9.26□□□□□ -0.93
SSBP1-212ENST00000489378 INTS2Q9H0H0 1204 aaKnown RBP9.26□□□□□ -0.93
SSBP1-212ENST00000489378 DPEP2Q9H4A9 486 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 FAM204AQ9H8W3 233 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 CYP4F12Q9HCS2 524 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 TMEM9Q9P0T7 183 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 KCND3Q9UK17 655 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 TRAF3IP3Q9Y228 551 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 OR1A2Q9Y585 309 aa9.26□□□□□ -0.93
SSBP1-212ENST00000489378 ANKRD36A6QL64 1941 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms