RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 LRRD1A4D1F6 860 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 SPOPO43791 374 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 LZTS3O60299 673 aaPredicted RBP13.61□□□□□ -0.23
LMO4-203ENST00000489303 KDELR1P24390 212 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 RGRP47804 291 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 COL9A2Q14055 689 aaPredicted RBP13.61□□□□□ -0.23
LMO4-203ENST00000489303 PTK2BQ14289 1009 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 FGL2Q14314 439 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 IFI16Q16666 785 aaKnown RBP13.61□□□□□ -0.23
LMO4-203ENST00000489303 RALGPS1Q5JS13 557 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 CPNE8Q86YQ8 564 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 RHOT1Q8IXI2 618 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 PCDH19Q8TAB3 1148 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 VOPP1Q96AW1 172 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 IFT43Q96FT9 208 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 PANX2Q96RD6 677 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 NUDCD1Q96RS6 583 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 PCDH12Q9NPG4 1184 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 DDX56Q9NY93 547 aaKnown RBP13.61□□□□□ -0.23
LMO4-203ENST00000489303 ATP8A1Q9Y2Q0 1164 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 CABIN1Q9Y6J0 2220 aa13.61□□□□□ -0.23
LMO4-203ENST00000489303 DOCK9Q9BZ29 2069 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 CACNA1GO43497 2377 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 POM121BA6NF01 834 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 H3BM21 787 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 TOR1BO14657 336 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
LMO4-203ENST00000489303 MUSKO15146 869 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 RAD51BO15315 384 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 SPINT1O43278 529 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 MFSD11O43934 449 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 SOCS5O75159 536 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 LDOC1O95751 146 aaPredicted RBP13.6□□□□□ -0.23
LMO4-203ENST00000489303 KRT1P04264 644 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 GARSP41250 739 aaKnown RBP13.6□□□□□ -0.23
LMO4-203ENST00000489303 THOP1P52888 689 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 ITKQ08881 620 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 GALNT2Q10471 571 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 BNIP3Q12983 259 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 PDE1CQ14123 709 aaPredicted RBP13.6□□□□□ -0.23
LMO4-203ENST00000489303 TCEAL1Q15170 157 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 LRRC38Q5VT99 294 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 NCBP2-AS2Q69YL0 99 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 TMPRSS7Q7RTY8 843 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 VSIG1Q86XK7 387 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 TMTC1Q8IUR5 882 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 EID2Q8N6I1 236 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 PDCD6IPQ8WUM4 868 aaKnown RBP13.6□□□□□ -0.23
LMO4-203ENST00000489303 FAF2Q96CS3 445 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 BMFQ96LC9 184 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 MGME1Q9BQP7 344 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 DNAJC28Q9NX36 388 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 RAXQ9Y2V3 346 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 GPSM3Q9Y4H4 160 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 PCDHA13Q9Y5I0 950 aa13.6□□□□□ -0.23
LMO4-203ENST00000489303 CFAP69A5D8W1 941 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 NEMP2A6NFY4 417 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 ZNF487B1APH4 448 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 MATN3O15232 486 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 SDC3O75056 442 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 PEX11BO96011 259 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 ALPPL2P10696 532 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 KRT10P13645 584 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 TNNT1P13805 278 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 ZFXP17010 805 aaPredicted RBP13.59□□□□□ -0.23
LMO4-203ENST00000489303 ITIH2P19823 946 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 CES1P23141 567 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 CCNCP24863 283 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 HNRNPKP61978 463 aaKnown RBP eCLIP13.59□□□□□ -0.23
LMO4-203ENST00000489303 YPEL5P62699 121 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 DNAJC3Q13217 504 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 CAMK2BQ13554 666 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 LRRC14Q15048 493 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 COL28A1Q2UY09 1125 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 PARGQ86W56 976 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 NDUFAF2Q8N183 169 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 CCNYQ8ND76 341 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 RAPGEF5Q92565 580 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 CENPTQ96BT3 561 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 ECHDC3Q96DC8 303 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 CRELD1Q96HD1 420 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 CNDP2Q96KP4 475 aaKnown RBP13.59□□□□□ -0.23
LMO4-203ENST00000489303 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 KLF6Q99612 283 aaPredicted RBP13.59□□□□□ -0.23
LMO4-203ENST00000489303 POLR1EQ9GZS1 481 aaKnown RBP13.59□□□□□ -0.23
LMO4-203ENST00000489303 CCDC86Q9H6F5 360 aaKnown RBP13.59□□□□□ -0.23
LMO4-203ENST00000489303 NT5MQ9NPB1 228 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 AMACRQ9UHK6 382 aa13.59□□□□□ -0.23
LMO4-203ENST00000489303 SPTY2D1-AS1A0A0U1RR47 76 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 GOLGA6L6A8MZA4 724 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 TRAFD1O14545 582 aaPredicted RBP13.58□□□□□ -0.24
LMO4-203ENST00000489303 ENC1O14682 589 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 APOL1O14791 398 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 LCA5LO95447 670 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 CPP00450 1065 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 PRKCGP05129 697 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 ELFN1P0C7U0 828 aa13.58□□□□□ -0.24
LMO4-203ENST00000489303 CYP2A6P11509 494 aaPredicted RBP13.58□□□□□ -0.24
LMO4-203ENST00000489303 CDK4P11802 303 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms