RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF662Q6ZS27 426 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.17■□□□□ 0.02
CXCL12-207ENST00000488591 KLHDC7BQ96G42 594 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 ALS2CR12Q96Q35 445 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 IL12RB2Q99665 862 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 FERMT1Q9BQL6 677 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 WRAP53Q9BUR4 548 aaKnown RBP15.17■□□□□ 0.02
CXCL12-207ENST00000488591 C1QTNF2Q9BXJ5 285 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 GAREM1Q9H706 876 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 LZTFL1Q9NQ48 299 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 DNAAF2Q9NVR5 837 aaKnown RBP15.17■□□□□ 0.02
CXCL12-207ENST00000488591 SEPT10Q9P0V9 454 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 SAE1Q9UBE0 346 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-207ENST00000488591 GGT7Q9UJ14 662 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 PHTF1Q9UMS5 762 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 PCDHB9Q9Y5E1 797 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 SNX11Q9Y5W9 270 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 HS3ST3A1Q9Y663 406 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 CAPN6Q9Y6Q1 641 aa15.17■□□□□ 0.02
CXCL12-207ENST00000488591 PCDH15Q96QU1 1955 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 CACNA1EQ15878 2313 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 TRPM6Q9BX84 2022 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 HACD1B0YJ81 288 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 APOC4-APOC2K7ER74 178 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 FPGTO14772 594 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 WNT9AO14904 365 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 MMP20O60882 483 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 APOC2P02655 101 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 HLA-DQB2P05538 268 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 PYGMP11217 842 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 PECAM1P16284 738 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-207ENST00000488591 ITIH2P19823 946 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 BNC1Q01954 994 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 DSC2Q02487 901 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 ADCY2Q08462 1091 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 SLC14A1Q13336 389 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 XRCC4Q13426 336 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 LAYNQ6UX15 382 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 ZC3H18Q86VM9 953 aaKnown RBP15.16■□□□□ 0.02
CXCL12-207ENST00000488591 ZSWIM9Q86XI8 627 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 SPOCK2Q92563 424 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 ALG3Q92685 438 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 HAUS1Q96CS2 278 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 HES6Q96HZ4 224 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 LENG8Q96PV6 779 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-207ENST00000488591 MYOCQ99972 504 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 GDF3Q9NR23 364 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 PACSIN2Q9UNF0 486 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-207ENST00000488591 RAI2Q9Y5P3 530 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 CFAP54Q96N23 3096 aa15.16■□□□□ 0.02
CXCL12-207ENST00000488591 CFAP69A5D8W1 941 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 GOLGA6L9A6NEM1 432 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 H7C0C1 242 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 SPINT1O43278 529 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 LZTS3O60299 673 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-207ENST00000488591 PGLSO95336 258 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 WNT1P04628 370 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-207ENST00000488591 MMP12P39900 470 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 CTSKP43235 329 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 ATP5OP48047 213 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 TRAF2Q12933 501 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 FGL2Q14314 439 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 PRKD1Q15139 912 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-207ENST00000488591 DCP2Q8IU60 420 aaKnown RBP15.15■□□□□ 0.02
CXCL12-207ENST00000488591 TMEM145Q8NBT3 493 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 DENND6BQ8NEG7 585 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 OR2I1PQ8NGU4 316 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 NSMCE3Q96MG7 304 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 AGAP3Q96P47 875 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 FZD3Q9NPG1 666 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 PPP2R2CQ9Y2T4 447 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 CEP250Q9BV73 2442 aa15.15■□□□□ 0.02
CXCL12-207ENST00000488591 DOCK9Q9BZ29 2069 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 A6NNZ2 444 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
CXCL12-207ENST00000488591 PRKCGP05129 697 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 ZNF883P0CG24 379 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 THEGLP0DJG4 465 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 CD86P42081 329 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 LIG3P49916 1009 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 EPHB1P54762 984 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 NXPH1P58417 271 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 ZBTB17Q13105 803 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 ZNF211Q13398 564 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-207ENST00000488591 SUZ12Q15022 739 aaKnown RBP15.14■□□□□ 0.01
CXCL12-207ENST00000488591 ZNF423Q2M1K9 1284 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 TEX44Q53QW1 395 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 B4GALNT4Q76KP1 1039 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 DPPA4Q7L190 304 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 DGLUCYQ7Z3D6 616 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 OXR1Q8N573 874 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 CNTD1Q8N815 330 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 ARRDC2Q8TBH0 407 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 VAT1Q99536 393 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 ERVMER34-1Q9H9K5 563 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 TM7SF3Q9NS93 570 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 CA5BQ9Y2D0 317 aa15.14■□□□□ 0.01
CXCL12-207ENST00000488591 SPTBN4Q9H254 2564 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms