RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 RFPL2O75678 378 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 PCNAP12004 261 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 SRCP12931 536 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 GPTP24298 496 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 CHATP28329 748 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 YWHAZP63104 245 aaKnown RBP3.99□□□□□ -1.77
CCDC66-221ENST00000487739 FAM72AQ5TYM5 149 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 HIST2H2BCQ6DN03 193 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 FAM72DQ6L9T8 149 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 CCNI2Q6ZMN8 369 aaPredicted RBP3.99□□□□□ -1.77
CCDC66-221ENST00000487739 FAM72BQ86X60 149 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 CPXM2Q8N436 756 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 PARP16Q8N5Y8 322 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 RAB40AQ8WXH6 277 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 CNOT9Q92600 299 aaKnown RBP3.99□□□□□ -1.77
CCDC66-221ENST00000487739 ERGIC1Q969X5 290 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 KIF17Q9P2E2 1029 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 TCF19Q9Y242 345 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 DNAJC16Q9Y2G8 782 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 RRP7AQ9Y3A4 280 aaKnown RBP3.99□□□□□ -1.77
CCDC66-221ENST00000487739 PCDHGB5Q9Y5G0 923 aa3.99□□□□□ -1.77
CCDC66-221ENST00000487739 CGNL1Q0VF96 1302 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 A0A0U1RQF3 1178 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 C17orf113A0A1B0GUU1 675 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 HSPB2A8KAH6 182 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 C16orf97H3BN30 126 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 MID1O15344 667 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 CEP104O60308 925 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 NDUFS7O75251 213 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 SLC22A3O75751 556 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 WEE2P0C1S8 567 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 CFC1BP0CG36 223 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 CFC1P0CG37 223 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 PTPN2P17706 415 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 CD58P19256 250 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 HNRNPH1P31943 449 aaKnown RBP3.98□□□□□ -1.77
CCDC66-221ENST00000487739 STX2P32856 288 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 BRWD1-AS2P59051 145 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 PRKG1Q13976 671 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 TRIM14Q14142 442 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 EFNB3Q15768 340 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 HSPB2Q16082 182 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 SOWAHAQ2M3V2 549 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 TBC1D26Q86UD7 250 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 CCDC146Q8IYE0 955 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 VPS37AQ8NEZ2 397 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 GJC3Q8NFK1 279 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 TRAPPC12Q8WVT3 735 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 ZC3HAV1LQ96H79 300 aaKnown RBP3.98□□□□□ -1.77
CCDC66-221ENST00000487739 LMAN2LQ9H0V9 348 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 LRRC4Q9HBW1 653 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 ZNF334Q9HCZ1 680 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-221ENST00000487739 RASSF1Q9NS23 344 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 ZFP57Q9NU63 452 aa3.98□□□□□ -1.77
CCDC66-221ENST00000487739 KLRF2D3W0D1 207 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 ZNF587BE7ETH6 402 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 SOCS6O14544 535 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 ZG16O60844 167 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 RXRAP19793 462 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 CDKN1AP38936 164 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 IL15P40933 162 aaPredicted RBP3.97□□□□□ -1.77
CCDC66-221ENST00000487739 VEGFCP49767 419 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 CLCN3P51790 818 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 FUT6P51993 359 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 NR1H2P55055 460 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 NEDD9Q14511 834 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 BRD3Q15059 726 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 ADCK5Q3MIX3 580 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 C19orf48Q6RUI8 117 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 SLC26A9Q7LBE3 791 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 WDSUB1Q8N9V3 476 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 OR13A1Q8NGR1 328 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 CEP70Q8NHQ1 597 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 SPATA22Q8NHS9 363 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 TTC14Q96N46 770 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 STN1Q9H668 368 aaKnown RBP3.97□□□□□ -1.77
CCDC66-221ENST00000487739 EPHX3Q9H6B9 360 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 PTPRHQ9HD43 1115 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 ABCF3Q9NUQ8 709 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 KCNS2Q9ULS6 477 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 DAAM1Q9Y4D1 1078 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 A3GALT2U3KPV4 340 aa3.97□□□□□ -1.77
CCDC66-221ENST00000487739 PEX12O00623 359 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 PER2O15055 1255 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 PLRG1O43660 514 aaKnown RBP3.96□□□□□ -1.78
CCDC66-221ENST00000487739 EDIL3O43854 480 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 SLC2A4P14672 509 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 ITGAXP20702 1163 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 ITGADQ13349 1161 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 PAPPA-AS1Q5QFB9 102 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 PLEKHA7Q6IQ23 1121 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 WDR73Q6P4I2 378 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 CCDC174Q6PII3 467 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 KRBA2Q6ZNG9 492 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 MOB3CQ70IA8 216 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 SATL1Q86VE3 508 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 KLHDC8BQ8IXV7 354 aa3.96□□□□□ -1.78
CCDC66-221ENST00000487739 SNAPC3Q92966 411 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms