RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 EBF4Q9BQW3 602 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 RTKNQ9BST9 563 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TM6SF2Q9BZW4 377 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 STX18Q9P2W9 335 aaKnown RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 MOSPD1Q9UJG1 213 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TLR6Q9Y2C9 796 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 EVPLLA8MZ36 301 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CDH13P55290 713 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ATP6V0D1P61421 351 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 PHEXP78562 749 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 IRF5Q13568 498 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CUZD1Q86UP6 607 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 EFCAB3Q8N7B9 438 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 BHLHE22Q8NFJ8 381 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-214ENST00000487615 SH3KBP1Q96B97 665 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 CLPTM1LQ96KA5 538 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TBATAQ96M53 351 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 SLC2A13Q96QE2 648 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 ACSS2Q9NR19 701 aa11.88□□□□□ -0.51
TRA2B-214ENST00000487615 TMEM247A6NEH6 219 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 TMEM88BA6NKF7 163 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 RPP40O75818 363 aaKnown RBP11.87□□□□□ -0.51
TRA2B-214ENST00000487615 ZNF865P0CJ78 1059 aaPredicted RBP11.87□□□□□ -0.51
TRA2B-214ENST00000487615 CHRNA4P43681 627 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 MAPKAPK2P49137 400 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 PSME3P61289 254 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 CYP2R1Q6VVX0 501 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 FAM9CQ8IZT9 166 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 CLYBLQ8N0X4 340 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 NDUFA13Q9P0J0 144 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 TBL1XO60907 577 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 KATNA1O75449 491 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 AMHP03971 560 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 SERPINA4P29622 427 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 SATB1Q01826 763 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 IL10RBQ08334 325 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 TBCELQ5QJ74 424 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 VPS50Q96JG6 964 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 CCDC90BQ9GZT6 254 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 SMOC2Q9H3U7 446 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 COPS7BQ9H9Q2 264 aaPredicted RBP11.87□□□□□ -0.51
TRA2B-214ENST00000487615 NMRK1Q9NWW6 199 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 TMEM161AQ9NX61 479 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
TRA2B-214ENST00000487615 TRAF6Q9Y4K3 522 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 TNPO3Q9Y5L0 923 aaKnown RBP11.87□□□□□ -0.51
TRA2B-214ENST00000487615 RFPL1O75677 317 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 IDH3AP50213 366 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 ZNF33AQ06730 810 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 ZBTB17Q13105 803 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 OLIG2Q13516 323 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 CCDC142Q17RM4 750 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 MARCH8Q5T0T0 291 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 RFWD3Q6PCD5 774 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 HJURPQ8NCD3 748 aaPredicted RBP11.87□□□□□ -0.51
TRA2B-214ENST00000487615 DBF4BQ8NFT6 615 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 KCNN1Q92952 543 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 SLC4A7Q9Y6M7 1214 aa11.87□□□□□ -0.51
TRA2B-214ENST00000487615 PTGESO14684 152 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 FAM189A1O60320 539 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 KRT6AP02538 564 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 KRT6BP04259 564 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 HLA-DQB2P05538 268 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 MAPK8P45983 427 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 KRT6CP48668 564 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 MLLT6P55198 1093 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 NAA20P61599 178 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 GNA12Q03113 381 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 CHRNB3Q05901 458 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 DDX39BQ13838 428 aaKnown RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 ZNF284Q2VY69 593 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 KHDC1Q4VXA5 237 aaKnown RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 AGMOQ6ZNB7 445 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 CCDC28BQ9BUN5 200 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 BPIFA1Q9NP55 256 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 MRPL17Q9NRX2 175 aaKnown RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 PCDHB9Q9Y5E1 797 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 AZIN1O14977 448 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 SLC7A4O43246 635 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 ACSL4O60488 711 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 PFKMP08237 780 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 SLC2A4P14672 509 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 MOGSQ13724 837 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 IYDQ6PHW0 289 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 MILR1Q7Z6M3 343 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 LDB1Q86U70 411 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 SERINC5Q86VE9 423 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 RASAL3Q86YV0 1011 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 VPS37AQ8NEZ2 397 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 OR4K2Q8NGD2 314 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 ZSCAN18Q8TBC5 510 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 PANX3Q96QZ0 392 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 KCTD14Q9BQ13 255 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 TMEM106CQ9BVX2 250 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 OXCT2Q9BYC2 517 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-214ENST00000487615 MAGEH1Q9H213 219 aa11.86□□□□□ -0.51
TRA2B-214ENST00000487615 ELOVL6Q9H5J4 265 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms