RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ECEL1O95672 775 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 GAS8O95995 478 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 ZSCAN5DPP0CG00 497 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 TIMP2P16035 220 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 CTPS1P17812 591 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 NFKBIAP25963 317 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 GRIA4P48058 902 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 FNTAP49354 379 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 DHPSP49366 369 aaPredicted RBP12.84□□□□□ -0.35
PRDM2-208ENST00000487453 VPS41P49754 854 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 WNT3AP56704 352 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 SEMG2Q02383 582 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
PRDM2-208ENST00000487453 MPP3Q13368 585 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 TRIP13Q15645 432 aaPredicted RBP12.84□□□□□ -0.35
PRDM2-208ENST00000487453 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 PARP6Q2NL67 630 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 PMS2CLQ68D20 193 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 USP45Q70EL2 814 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 NDUFAF2Q8N183 169 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 GLIS1Q8NBF1 620 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 LRRC45Q96CN5 670 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 WRAP53Q9BUR4 548 aaKnown RBP12.84□□□□□ -0.35
PRDM2-208ENST00000487453 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 C6orf106Q9H6K1 298 aaPredicted RBP12.84□□□□□ -0.35
PRDM2-208ENST00000487453 PREBQ9HCU5 417 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 PCDH12Q9NPG4 1184 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 RAB6BQ9NRW1 208 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 VPS45Q9NRW7 570 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 FADS3Q9Y5Q0 445 aa12.84□□□□□ -0.35
PRDM2-208ENST00000487453 FANCMQ8IYD8 2048 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 CACNA1IQ9P0X4 2223 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 CCDC188H7C350 402 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 SPINT1O43278 529 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 AP1G1O43747 822 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 FZD6O60353 706 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 RNGTTO60942 597 aaKnown RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 RHOBTB1O94844 696 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 ALPIP09923 528 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 ITIH2P19823 946 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 MAT2AP31153 395 aaKnown RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 RPL22P35268 128 aaKnown RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 MMP12P39900 470 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 LMAN1P49257 510 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 SUOXP51687 545 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 PPP2CBP62714 309 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 PPP2CAP67775 309 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 BASP1P80723 227 aaKnown RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 CDK18Q07002 472 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 C2orf54Q08AI8 447 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 PPP1R7Q15435 360 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 PLK5Q496M5 336 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 LYSMD4Q5XG99 296 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 KIAA0895LQ68EN5 471 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 KDELC1Q6UW63 502 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 CXorf40AQ8TE69 158 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 TADA1Q96BN2 335 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 FEM1CQ96JP0 617 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 MLPHQ9BV36 600 aaPredicted RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 FICDQ9BVA6 458 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 DUSP15Q9H1R2 295 aaPredicted RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 EPC1Q9H2F5 836 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 B4GALT6Q9UBX8 382 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 CDC23Q9UJX2 597 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 PHTF1Q9UMS5 762 aa12.83□□□□□ -0.36
PRDM2-208ENST00000487453 SMG5Q9UPR3 1016 aaKnown RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 ATXN2Q99700 1313 aaKnown RBP12.83□□□□□ -0.36
PRDM2-208ENST00000487453 CEP192Q8TEP8 1941 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 WDFY4Q6ZS81 3184 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 A0A0J9YYE9 177 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 A0A1W2PQU0 124 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 CAPN8A6NHC0 703 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
PRDM2-208ENST00000487453 RIOK3O14730 519 aaKnown RBP12.82□□□□□ -0.36
PRDM2-208ENST00000487453 AREL1O15033 823 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 TSPAN6O43657 245 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 USP12O75317 370 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 NDST3O95803 873 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 TRBC1P01850 177 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 KRT14P02533 472 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 SLC4A1P02730 911 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 ELFN1P0C7U0 828 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 CYP2A6P11509 494 aaPredicted RBP12.82□□□□□ -0.36
PRDM2-208ENST00000487453 FDFT1P37268 417 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 PTGER3P43115 390 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 CHRNA4P43681 627 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 TERF1P54274 439 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 RPL26P61254 145 aaKnown RBP12.82□□□□□ -0.36
PRDM2-208ENST00000487453 DR1Q01658 176 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 PTPRRQ15256 657 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 DNTTIP2Q5QJE6 756 aaKnown RBP12.82□□□□□ -0.36
PRDM2-208ENST00000487453 SEL1L3Q68CR1 1132 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 KIAA1161Q6NSJ0 714 aa12.82□□□□□ -0.36
PRDM2-208ENST00000487453 C4orf22Q6V702 233 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms