RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PER3P56645 1201 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 IRF4Q15306 451 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 SMTNL2Q2TAL5 461 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 ANO6Q4KMQ2 910 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 EFHC1Q5JVL4 640 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 SASS6Q6UVJ0 657 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 ENPP7Q6UWV6 458 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 HPS6Q86YV9 775 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 IRF2BP1Q8IU81 584 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 NELFCDQ8IXH7 590 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 RBMXL3Q8N7X1 1067 aaKnown RBP11.78□□□□□ -0.52
TRIM56-204ENST00000487252 TAS1R2Q8TE23 839 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 PDXPQ96GD0 296 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 CTRCQ99895 268 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 IMPG2Q9BZV3 1241 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 TNKS2Q9H2K2 1166 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 CISHQ9NSE2 258 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 TMEM9Q9P0T7 183 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 KLQ9UEF7 1012 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 VPS51Q9UID3 782 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 CROTQ9UKG9 612 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 ZNF451Q9Y4E5 1061 aa11.78□□□□□ -0.52
TRIM56-204ENST00000487252 IGHV1OR21-1A0A087WYE8 117 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 CDC14CA4D256 554 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 C16orf96A6NNT2 1141 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 KCNU1A8MYU2 1149 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 ZW10O43264 779 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 DPM1O60762 260 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 ZG16O60844 167 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 CREG1O75629 220 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 TNFP01375 233 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 IGLV3-25P01717 112 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 APOEP02649 317 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 SETSIPP0DME0 302 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 LCP1P13796 627 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 MPSTP25325 297 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 HTR1BP28222 390 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 MAZP56270 477 aaKnown RBP11.77□□□□□ -0.53
TRIM56-204ENST00000487252 KRT83P78385 493 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 STX1AQ16623 288 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 ZC3H12AQ5D1E8 599 aaKnown RBP11.77□□□□□ -0.53
TRIM56-204ENST00000487252 CRB2Q5IJ48 1285 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 RABGAP1LQ5R372 815 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 FAM26FQ5R3K3 315 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 FBXL22Q6P050 247 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 TMEM71Q6P5X7 295 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 FOXR2Q6PJQ5 311 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 BEND5Q7L4P6 421 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 LYSMD3Q7Z3D4 306 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 ARHGAP22Q7Z5H3 698 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 TAF8Q7Z7C8 310 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 TAC4Q86UU9 113 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 SLC9A9Q8IVB4 645 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 ZNF295-AS1Q8N0V1 137 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 CLEC4CQ8WTT0 213 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 SLC35F5Q8WV83 523 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 ARHGEF26Q96DR7 871 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 TIGD1Q96MW7 591 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 HEPHQ9BQS7 1158 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 C2orf49Q9BVC5 232 aaPredicted RBP11.77□□□□□ -0.53
TRIM56-204ENST00000487252 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 C1QTNF7Q9BXJ2 289 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 DPEP2Q9H4A9 486 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 APMAPQ9HDC9 416 aa11.77□□□□□ -0.53
TRIM56-204ENST00000487252 KLF2Q9Y5W3 355 aaPredicted RBP11.77□□□□□ -0.53
TRIM56-204ENST00000487252 ACANP16112 2415 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 ZSCAN5CA6NGD5 496 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-204ENST00000487252 RHPN2P1A8MT19 583 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-204ENST00000487252 NEMP1O14524 444 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 LRRTM2O43300 516 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 TM7SF2O76062 418 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 TPM3P06753 285 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 MSNP26038 577 aaKnown RBP11.76□□□□□ -0.53
TRIM56-204ENST00000487252 ART3Q13508 389 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 IQCB1Q15051 598 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 CHRNA6Q15825 494 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 C5orf22Q49AR2 442 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 CPZQ66K79 652 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 PMF1Q6P1K2 205 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 CNNM4Q6P4Q7 775 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 UBA3Q8TBC4 463 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 KIAA1524Q8TCG1 905 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 OR1E3Q8WZA6 343 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 WDR92Q96MX6 357 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 CEP44Q9C0F1 390 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 TWSG1Q9GZX9 223 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 HPSEQ9Y251 543 aa11.76□□□□□ -0.53
TRIM56-204ENST00000487252 NBEAL1Q6ZS30 2694 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 O00370 1275 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 MMP20O60882 483 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 CUTAO60888 179 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 CLDN11O75508 207 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 CD1EP15812 388 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 TIMP2P16035 220 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 CAPN3P20807 821 aa11.75□□□□□ -0.53
TRIM56-204ENST00000487252 CCNHP51946 323 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms