RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TBC1D3DA0A087WVF3 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3IA0A087WXS9 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3EA0A087X179 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3KA0A087X1G2 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 A0A0J9YYE9 177 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3FA6NER0 549 aaPredicted RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 METTL12A8MUP2 240 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 ANKRD66B4E2M5 251 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3LB9A6J9 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 PSMD3O43242 534 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 SPINT1O43278 529 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 PMPCBO75439 489 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 URI1O94763 535 aaPredicted RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 RHOBTB1O94844 696 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TRBC1P01850 177 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3HP0C7X1 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 ETS1P14921 441 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 RPL22P35268 128 aaKnown RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 FDFT1P37268 417 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 NBL1P41271 181 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 GRIA4P48058 902 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 CCR5P51681 352 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 WNT3AP56704 352 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TMEM52BQ4KMG9 183 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 PMS2CLQ68D20 193 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3GQ6DHY5 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3CQ6IPX1 549 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 ERAP2Q6P179 960 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 LPCAT2Q7L5N7 544 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 ZNF572Q7Z3I7 529 aaPredicted RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 TBC1D3Q8IZP1 549 aaPredicted RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 PAF1Q8N7H5 531 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 GLIS1Q8NBF1 620 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 FOXJ1Q92949 421 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 SLCO2A1Q92959 643 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 IFT43Q96FT9 208 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 MCCC1Q96RQ3 725 aaPredicted RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 MLPHQ9BV36 600 aaPredicted RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 DDX47Q9H0S4 455 aaKnown RBP19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 PCDH12Q9NPG4 1184 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 NEU2Q9Y3R4 380 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 NUMA1Q14980 2115 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 CEP192Q8TEP8 1941 aa19.49■□□□□ 0.71
PCOLCE-208ENST00000487172 ZNF500O60304 480 aaPredicted RBP19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 NDST3O95803 873 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 ELF2Q15723 593 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 PCSK7Q16549 785 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 KIAA0895LQ68EN5 471 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 KCTD11Q693B1 232 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 KIAA1161Q6NSJ0 714 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 PRUNE1Q86TP1 453 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 TRIM69Q86WT6 500 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 SPATA4Q8NEY3 305 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 C6orf106Q9H6K1 298 aaPredicted RBP19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 ETNK1Q9HBU6 452 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 THADAQ6YHU6 1953 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 ABCA7Q8IZY2 2146 aa19.48■□□□□ 0.71
PCOLCE-208ENST00000487172 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 ERI2A8K979 691 aaKnown RBP19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 PCDH8O95206 1070 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 KRT14P02533 472 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 CYP2A6P11509 494 aaPredicted RBP19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 ITIH2P19823 946 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 ADRA1AP35348 466 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 MMP12P39900 470 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 EPHB1P54762 984 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 CKAP4Q07065 602 aaKnown RBP19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 SEMA5AQ13591 1074 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 QPCTQ16769 361 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 WHAMMP3Q1A5X7 153 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 CCDC70Q6NSX1 233 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 RANBP10Q6VN20 620 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 USP45Q70EL2 814 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 DPPA4Q7L190 304 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 SLC41A1Q8IVJ1 513 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 TMEFF1Q8IYR6 380 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 IPMKQ8NFU5 416 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 LRRC45Q96CN5 670 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 LYSMD1Q96S90 227 aa19.47■□□□□ 0.71
PCOLCE-208ENST00000487172 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 FAM47DPA6NHR8 397 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 F5H423 210 aaPredicted RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 NEMP1O14524 444 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 LATO43561 262 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 RNGTTO60942 597 aaKnown RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 AP2A1O95782 977 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 GAS8O95995 478 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 ZSCAN5DPP0CG00 497 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 HLA-DPA1P20036 260 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 NUDT1P36639 197 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 TNNT3P45378 269 aaPredicted RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 RPS21P63220 83 aaKnown RBP19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 RALGDSQ12967 914 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 TMEM259Q4ZIN3 620 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 LRRC73Q5JTD7 316 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 PRR23BQ6ZRT6 265 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 HORMAD1Q86X24 394 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 LPCAT1Q8NF37 534 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 ASB12Q8WXK4 309 aa19.46■□□□□ 0.71
PCOLCE-208ENST00000487172 DNASE2BQ8WZ79 361 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms