RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 EXOSC6Q5RKV6 272 aaKnown RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 SFRP5Q5T4F7 317 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 NOTUMQ6P988 496 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 ADAMTSL4Q6UY14 1074 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 ERN2Q76MJ5 926 aaKnown RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 CEP57Q86XR8 500 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 FAM126BQ8IXS8 530 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 SYCE1Q8N0S2 351 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 RASGEF1CQ8N431 466 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 ZGPATQ8N5A5 531 aaKnown RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 EIF1ADQ8N9N8 165 aaKnown RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 CCDC63Q8NA47 563 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 POC5Q8NA72 575 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 GLB1L3Q8NCI6 653 aaPredicted RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 SCAMP5Q8TAC9 235 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 GATA6Q92908 595 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 TMIGD2Q96BF3 282 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 LRRC46Q96FV0 321 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 TSPAN17Q96FV3 270 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 RPGRIP1Q96KN7 1286 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 LMF1Q96S06 567 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 MNTQ99583 582 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 FUZQ9BT04 418 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 MTG1Q9BT17 334 aaPredicted RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 PINK1Q9BXM7 581 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 USP26Q9BXU7 913 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 THAP2Q9H0W7 228 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 SLC25A18Q9H1K4 315 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 ADNPQ9H2P0 1102 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 ST6GALNAC4Q9H4F1 302 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 GPR27Q9NS67 375 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 CATSPERZQ9NTU4 200 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 KLHL14Q9P2G3 628 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 ANKMY1Q9P2S6 941 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 SEC63Q9UGP8 760 aaKnown RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 ARMCX3Q9UH62 379 aaPredicted RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 CROTQ9UKG9 612 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 WASF3Q9UPY6 502 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 MTMR6Q9Y217 621 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 MTO1Q9Y2Z2 717 aaKnown RBP5.6□□□□□ -1.51
SF1-217ENST00000486960 RWDD3Q9Y3V2 267 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.6□□□□□ -1.51
SF1-217ENST00000486960 APC2O95996 2303 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 MICAL3Q7RTP6 2002 aa5.6□□□□□ -1.51
SF1-217ENST00000486960 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 MAST3O60307 1309 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 KIAA1217Q5T5P2 1943 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PNMA6EA0A0J9YXQ4 647 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 LOC100506127A0A0U1RQW1 187 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 ERICH2A1L162 156 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 TMEM232C9JQI7 657 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 H7C1W4 665 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PYCARD-AS1I3L0S3 204 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 GRM8O00222 908 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 GPRIN2O60269 458 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 MMP20O60882 483 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PPP6R2O75170 966 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 GUCY1B2O75343 617 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PSMD10O75832 226 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 SASH3O75995 380 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 RECQL5O94762 991 aaPredicted RBP5.59□□□□□ -1.51
SF1-217ENST00000486960 OR5F1O95221 314 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PDE8BO95263 885 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 KCNK5O95279 499 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 S1PR4O95977 384 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 MT-ND5P03915 603 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 CSF2P04141 144 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 FYNP06241 537 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 RALBP11234 206 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 FSHRP23945 695 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 TNFRSF8P28908 595 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 GBP1P32455 592 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 ICAM3P32942 547 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 BSGP35613 385 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 SLC16A2P36021 539 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 TRIM23P36406 574 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 HTR2BP41595 481 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 CCR10P46092 362 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PLCD1P51178 756 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PSMD7P51665 324 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 CLCNKAP51800 687 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 MNAT1P51948 309 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 HK3P52790 923 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 CAPZA1P52907 286 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 KIAA1024LP59773 190 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 NKX6-1P78426 367 aaPredicted RBP5.59□□□□□ -1.51
SF1-217ENST00000486960 AMPD2Q01433 879 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 SCAPQ12770 1279 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 RAPSNQ13702 412 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 BTG3Q14201 252 aaPredicted RBP5.59□□□□□ -1.51
SF1-217ENST00000486960 GAMTQ14353 236 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 MAPRE2Q15555 327 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 CRY1Q16526 586 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 AANATQ16613 207 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 CEP78Q5JTW2 689 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 GNASQ5JWF2 1037 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 COLEC12Q5KU26 742 aa5.59□□□□□ -1.51
SF1-217ENST00000486960 PPP1R26Q5T8A7 1209 aaPredicted RBP5.59□□□□□ -1.51
SF1-217ENST00000486960 RNASEH2BQ5TBB1 312 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms