RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ZCCHC14Q8WYQ9 949 aaKnown RBP12.98□□□□□ -0.33
CHMP3-208ENST00000486404 VOPP1Q96AW1 172 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 BMFQ96LC9 184 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 NUDCD1Q96RS6 583 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 KLF6Q99612 283 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-208ENST00000486404 MGME1Q9BQP7 344 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 GPR27Q9NS67 375 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 EVA1BQ9NVM1 165 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 COQ6Q9Y2Z9 468 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 PCDHGA1Q9Y5H4 931 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 AKAP13Q12802 2813 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
CHMP3-208ENST00000486404 ARID1BQ8NFD5 2236 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 A0A1W2PQ67 120 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 TOR1BO14657 336 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 SPOPO43791 374 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 MAFKO60675 156 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 MAP3K6O95382 1288 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 PCCBP05166 539 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 PROS1P07225 676 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 CDK4P11802 303 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 TNNT1P13805 278 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 JUNDP17535 347 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 MX2P20592 715 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 DGKAP23743 735 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 GARSP41250 739 aaKnown RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 MAXP61244 160 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 SEMG2Q02383 582 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 GALNT2Q10471 571 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 FZD2Q14332 565 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 SPA17Q15506 151 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 ATP13A4Q4VNC1 1196 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 RALGPS1Q5JS13 557 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 DHRS13Q6UX07 377 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 MACC1Q6ZN28 852 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 KANSL1Q7Z3B3 1105 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 TP53I13Q8NBR0 393 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 ZNF548Q8NEK5 533 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 OR4C6Q8NH72 309 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 GATA6Q92908 595 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 SLC13A1Q9BZW2 595 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 POLR1EQ9GZS1 481 aaKnown RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 UCKL1Q9NWZ5 548 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 APOBEC3BQ9UH17 382 aaKnown RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 INTUQ9ULD6 942 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
CHMP3-208ENST00000486404 GOLGA4Q13439 2230 aaKnown RBP12.97□□□□□ -0.33
CHMP3-208ENST00000486404 MYLKQ15746 1914 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
CHMP3-208ENST00000486404 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 MTA2O94776 668 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 IPO7O95373 1038 aaKnown RBP12.96□□□□□ -0.33
CHMP3-208ENST00000486404 CSF2P04141 144 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 C1SP09871 688 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 KRT10P13645 584 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 CKMT2P17540 419 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 CA4P22748 312 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 HTR1BP28222 390 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 CYLC1P35663 651 aaPredicted RBP12.96□□□□□ -0.33
CHMP3-208ENST00000486404 NOP2P46087 812 aaKnown RBP12.96□□□□□ -0.33
CHMP3-208ENST00000486404 ACADVLP49748 655 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 ARSEP51690 589 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 PFN3P60673 137 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 YPEL5P62699 121 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 ZNF211Q13398 564 aaPredicted RBP12.96□□□□□ -0.33
CHMP3-208ENST00000486404 ACOX1Q15067 660 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 KDM7AQ6ZMT4 941 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 DPPA4Q7L190 304 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 PGBD5Q8N414 524 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 ATL2Q8NHH9 583 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 BTN2A2Q8WVV5 523 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 CENPTQ96BT3 561 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 ECHDC3Q96DC8 303 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 DUSP23Q9BVJ7 150 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 MAK16Q9BXY0 300 aaKnown RBP12.96□□□□□ -0.33
CHMP3-208ENST00000486404 NOD2Q9HC29 1040 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 NLGN3Q9NZ94 848 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 PCDHGC4Q9Y5F7 938 aa12.96□□□□□ -0.33
CHMP3-208ENST00000486404 FRYQ5TBA9 3013 aa12.96□□□□□ -0.34
CHMP3-208ENST00000486404 TRIM38O00635 465 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-208ENST00000486404 AQP9O43315 295 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 DKK1O94907 266 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 PEX11BO96011 259 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 CYP2A6P11509 494 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-208ENST00000486404 KDELR1P24390 212 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 IL4RP24394 825 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 SLC1A1P43005 524 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 MAGEA1P43355 309 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 ZNF75DP51815 510 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 RALGDSQ12967 914 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 ILKQ13418 452 aa12.95□□□□□ -0.34
CHMP3-208ENST00000486404 PROX2Q3B8N5 592 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms