RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TADA2BQ86TJ2 420 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 ACOT1Q86TX2 421 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 PRPF39Q86UA1 669 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 VASH2Q86V25 355 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 CBWD2Q8IUF1 395 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 OR14C36Q8NHC7 312 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 SLC2A14Q8TDB8 520 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 JAKMIP2Q96AA8 810 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 CALML4Q96GE6 196 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 MCMBPQ9BTE3 642 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 KLHL25Q9H0H3 589 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 MRPL44Q9H9J2 332 aaKnown RBP6.8□□□□□ -1.32
SMC4-217ENST00000485867 CLIC5Q9NZA1 410 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 WHRNQ9P202 907 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 SEL1LQ9UBV2 794 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 CYTH4Q9UIA0 394 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 PLAAQ9Y263 795 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 CA5BQ9Y2D0 317 aa6.8□□□□□ -1.32
SMC4-217ENST00000485867 NAV3Q8IVL0 2385 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3DA0A087WVF3 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3IA0A087WXS9 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3EA0A087X179 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3KA0A087X1G2 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CPED1A4D0V7 1026 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3FA6NER0 549 aaPredicted RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 ZNF233A6NK53 670 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3LB9A6J9 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 PRAMEF26H0Y7S4 382 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 KIAA0391O15091 583 aaKnown RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 SCAMP1O15126 338 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CASC3O15234 703 aaKnown RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 RTN2O75298 545 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 GCNT3O95395 438 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CELA3BP08861 270 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3HP0C7X1 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 FAM200BP0CF97 657 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 GLI4P10075 376 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 RALAP11233 206 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 C5AR1P21730 350 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CD70P32970 193 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 DRD3P35462 400 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 KIF11P52732 1056 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 SLURP1P55000 103 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CDKN3Q16667 212 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 POM121L1PQ3SYA9 428 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 MANEAQ5SRI9 462 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 ARL6IP4Q66PJ3 421 aaKnown RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3GQ6DHY5 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3CQ6IPX1 549 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CRTC1Q6UUV9 634 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 SCARA5Q6ZMJ2 495 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CLEC20AQ6ZU45 233 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 EFL1Q7Z2Z2 1120 aaKnown RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 TRIM69Q86WT6 500 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D3Q8IZP1 549 aaPredicted RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 SYCP3Q8IZU3 236 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TMEM145Q8NBT3 493 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 SPATA20Q8TB22 786 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 FNIP1Q8TF40 1166 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 LARP4BQ92615 738 aaKnown RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 FAM131CQ96AQ9 280 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 MIB2Q96AX9 1013 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 MRGPRX3Q96LB0 322 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 AK8Q96MA6 479 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CDK5RAP1Q96SZ6 601 aaKnown RBP6.79□□□□□ -1.32
SMC4-217ENST00000485867 CGRRF1Q99675 332 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 FGFBP2Q9BYJ0 223 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 SDCBP2Q9H190 292 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 PNPLA8Q9NP80 782 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 FAM49BQ9NUQ9 324 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 MARCH2Q9P0N8 246 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 TBC1D7Q9P0N9 293 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 HMGXB4Q9UGU5 601 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 KIF3AQ9Y496 699 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 CSMD1Q96PZ7 3565 aa6.79□□□□□ -1.32
SMC4-217ENST00000485867 PCNX1Q96RV3 2341 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 SPENQ96T58 3664 aaKnown RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 SHANK1Q9Y566 2161 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 SLC12A8A0AV02 714 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 EME2A4GXA9 379 aaPredicted RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 NEMP2A6NFY4 417 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 PLD2O14939 933 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 AURKAO14965 403 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 NEBLO76041 1014 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ASLP04424 464 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 DLATP10515 647 aaKnown RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 GAP43P17677 238 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 TNNI1P19237 187 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ELAVL4P26378 380 aaKnown RBP6.78□□□□□ -1.32
SMC4-217ENST00000485867 TNFRSF8P28908 595 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ADORA2BP29275 332 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ATICP31939 592 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 UGT1A5P35504 534 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 UBA7P41226 1012 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 SGSHP51688 502 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 METAP1P53582 386 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 POLE2P56282 527 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ST8SIA6P61647 398 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 KCNAB2Q13303 367 aa6.78□□□□□ -1.32
SMC4-217ENST00000485867 ALCAMQ13740 583 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms