RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 HSD3B7Q9H2F3 369 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 TCEAL2Q9H3H9 227 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 MBNL1Q9NR56 388 aaKnown RBP10.7□□□□□ -0.7
HMGN1-215ENST00000485550 STARD5Q9NSY2 213 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 NLGN3Q9NZ94 848 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 FZD10Q9ULW2 581 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 ENTPD2Q9Y5L3 495 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 NBPF19A0A087WUL8 3843 aa10.7□□□□□ -0.7
HMGN1-215ENST00000485550 CPED1A4D0V7 1026 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CASC3O15234 703 aaKnown RBP10.69□□□□□ -0.7
HMGN1-215ENST00000485550 EFSO43281 561 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 SUV39H1O43463 412 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 PIGNO95427 931 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 IGSF6O95976 241 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CSF2P04141 144 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 NTRK1P04629 796 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 TIMP2P16035 220 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 FERP16591 822 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 DUSP3P51452 185 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-215ENST00000485550 RAD51Q06609 339 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 EIF2B5Q13144 721 aaKnown RBP10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CDKN3Q16667 212 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 KLHL40Q2TBA0 621 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 DEFB133Q30KQ1 61 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 ACAD10Q6JQN1 1059 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 ZNF574Q6ZN55 896 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-215ENST00000485550 IRF2BP2Q7Z5L9 587 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 PARGQ86W56 976 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 RBFAQ8N0V3 343 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 FAM174AQ8TBP5 190 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CXorf40AQ8TE69 158 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CENPTQ96BT3 561 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 IFT43Q96FT9 208 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 LENG8Q96PV6 779 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-215ENST00000485550 EPAS1Q99814 870 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CNPY3Q9BT09 278 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CATSPERBQ9H7T0 1116 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 GPR27Q9NS67 375 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 PCSK1NQ9UHG2 260 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 COQ6Q9Y2Z9 468 aa10.69□□□□□ -0.7
HMGN1-215ENST00000485550 CXorf51AA0A1B0GTR3 108 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 ZSCAN5CA6NGD5 496 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 GOLGA6L22H0YM25 854 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 H3BM21 787 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 J3KR12 359 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 AREL1O15033 823 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 AQP9O43315 295 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 TM7SF2O76062 418 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 TNFSF15O95150 251 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 PRKCGP05129 697 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 FAM87AP0C7U9 286 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 NME1P15531 152 aaKnown RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 ITGB6P18564 788 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 XPAP23025 273 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 PSMA2P25787 234 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 IGFALSP35858 605 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 THOP1P52888 689 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 ADKP55263 362 aaKnown RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 YBEYP58557 167 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 TPI1P60174 286 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 PFN3P60673 137 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 TYRO3Q06418 890 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 SERINC3Q13530 473 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 TCEA2Q15560 299 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 CA9Q16790 459 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 INO80DQ53TQ3 878 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 PRRT3Q5FWE3 981 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 CCDC183Q5T5S1 534 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 GUSBP11Q6P575 273 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 USP53Q70EK8 1073 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 EFL1Q7Z2Z2 1120 aaKnown RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 ARL14Q8N4G2 192 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 ASB12Q8WXK4 309 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 WNT2BQ93097 391 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 ARHGEF26Q96DR7 871 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 IL12RB2Q99665 862 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 NCAPGQ9BPX3 1015 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 DUSP23Q9BVJ7 150 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 OSBPL1AQ9BXW6 950 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 SLC39A8Q9C0K1 460 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 DHX35Q9H5Z1 703 aaKnown RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 LHX3Q9UBR4 397 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 UBA2Q9UBT2 640 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 PNMA8BQ9ULN7 279 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-215ENST00000485550 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 NOTCH2Q04721 2471 aa10.68□□□□□ -0.7
HMGN1-215ENST00000485550 CREBBPQ92793 2442 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 LRRK1Q38SD2 2015 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 CHD5Q8TDI0 1954 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 USP9YO00507 2555 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-215ENST00000485550 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 WASH4PA8MWX3 477 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 DAPK3O43293 454 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 LZTS3O60299 673 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-215ENST00000485550 GCATO75600 419 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 CCDC172P0C7W6 258 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
HMGN1-215ENST00000485550 TLE1Q04724 770 aa10.67□□□□□ -0.7
HMGN1-215ENST00000485550 MAMLD1Q13495 774 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms