RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 HHIPQ96QV1 700 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 HDAC8Q9BY41 377 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 CASS4Q9NQ75 786 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHMP3-207ENST00000485465 SCML1Q9UN30 329 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 SHOC2Q9UQ13 582 aa17.69■□□□□ 0.42
CHMP3-207ENST00000485465 V9GYY5 206 aaPredicted RBP17.69■□□□□ 0.42
CHMP3-207ENST00000485465 BDP1A6H8Y1 2624 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 ANKRD66B4E2M5 251 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 GOLGA8MH3BSY2 632 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 PLK4O00444 970 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 PAPSS2O95340 614 aaPredicted RBP17.68■□□□□ 0.42
CHMP3-207ENST00000485465 APBB3O95704 486 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 FGF1P05230 155 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 DRD3P35462 400 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 GRIA4P48058 902 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 CAV1Q03135 178 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 CNTN1Q12860 1018 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 CDH17Q12864 832 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 UGP2Q16851 508 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 LRRC8BQ6P9F7 803 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 ZDHHC24Q6UX98 284 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 ZNF534Q76KX8 674 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 ERN2Q76MJ5 926 aaKnown RBP17.68■□□□□ 0.42
CHMP3-207ENST00000485465 TTC7BQ86TV6 843 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 NDUFAF2Q8N183 169 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 PGBD3Q8N328 593 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 HDDC3Q8N4P3 179 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 CAMKK1Q8N5S9 505 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 DNAAF3Q8N9W5 541 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 COL25A1Q9BXS0 654 aaPredicted RBP17.68■□□□□ 0.42
CHMP3-207ENST00000485465 EPC1Q9H2F5 836 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 ANKZF1Q9H8Y5 726 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 SPATA6Q9NWH7 488 aaPredicted RBP17.68■□□□□ 0.42
CHMP3-207ENST00000485465 BCCIPQ9P287 314 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHMP3-207ENST00000485465 PPIL1Q9Y3C6 166 aa17.68■□□□□ 0.42
CHMP3-207ENST00000485465 A0A0J9YYE9 177 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 UPK3BL1B0FP48 263 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 UPK3BL2E5RIL1 263 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 AP3B1O00203 1094 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 TRBC1P01850 177 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 ACADMP11310 421 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 MLNP12872 115 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 ADRB3P13945 408 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 CTPS1P17812 591 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 XPAP23025 273 aaPredicted RBP17.67■□□□□ 0.42
CHMP3-207ENST00000485465 P2RY2P41231 377 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 SUOXP51687 545 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 NEK3P51956 506 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 PLTPP55058 493 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 SFSWAPQ12872 951 aaKnown RBP17.67■□□□□ 0.42
CHMP3-207ENST00000485465 CUL1Q13616 776 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 ERCC6LQ2NKX8 1250 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 TTC31Q49AM3 519 aaPredicted RBP17.67■□□□□ 0.42
CHMP3-207ENST00000485465 ANO7Q6IWH7 933 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 FBXL19Q6PCT2 694 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 CAND1Q86VP6 1230 aaKnown RBP17.67■□□□□ 0.42
CHMP3-207ENST00000485465 RASSF3Q86WH2 238 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 FBXL6Q8N531 539 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 TMEM105Q8N8V8 129 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 MDGA1Q8NFP4 955 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 OMDQ99983 421 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 FRMD8Q9BZ67 464 aaPredicted RBP17.67■□□□□ 0.42
CHMP3-207ENST00000485465 XAB2Q9HCS7 855 aaKnown RBP17.67■□□□□ 0.42
CHMP3-207ENST00000485465 PIH1D1Q9NWS0 290 aaKnown RBP17.67■□□□□ 0.42
CHMP3-207ENST00000485465 FBXL12Q9NXK8 326 aa17.67■□□□□ 0.42
CHMP3-207ENST00000485465 A0A1W2PP55 124 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 K7ESF4 209 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 RNASEH2AO75792 299 aaKnown RBP17.66■□□□□ 0.42
CHMP3-207ENST00000485465 PRKCGP05129 697 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 TPH1P17752 444 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 ABL2P42684 1182 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 CARSP49589 748 aaKnown RBP17.66■□□□□ 0.42
CHMP3-207ENST00000485465 CCDC15Q0P6D6 951 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 PTPRRQ15256 657 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 LRRC73Q5JTD7 316 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 PIP5KL1Q5T9C9 394 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.66■□□□□ 0.42
CHMP3-207ENST00000485465 USP30Q70CQ3 517 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 FBXO25Q8TCJ0 367 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 GANCQ8TET4 914 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 RUBCNQ92622 972 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 RAB7BQ96AH8 199 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 FAM131CQ96AQ9 280 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 SCRN2Q96FV2 425 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 SERPINB12Q96P63 405 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 SMIM14Q96QK8 99 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 MCCC1Q96RQ3 725 aaPredicted RBP17.66■□□□□ 0.42
CHMP3-207ENST00000485465 FAM129AQ9BZQ8 928 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 PCDH12Q9NPG4 1184 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 ITM2CQ9NQX7 267 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 ZDHHC18Q9NUE0 388 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 SERGEFQ9UGK8 458 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 EBF1Q9UH73 591 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
CHMP3-207ENST00000485465 ANKRD36A6QL64 1941 aa17.65■□□□□ 0.42
CHMP3-207ENST00000485465 AVILO75366 819 aa17.65■□□□□ 0.42
CHMP3-207ENST00000485465 ALPIP09923 528 aa17.65■□□□□ 0.42
CHMP3-207ENST00000485465 NFKBIAP25963 317 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms