RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 IHHQ14623 411 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 CXorf57Q6NSI4 855 aaKnown RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 POTEHQ6S545 545 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 RPS27LQ71UM5 84 aaKnown RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 OTOAQ7RTW8 1153 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 RNF168Q8IYW5 571 aaPredicted RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 SREK1Q8WXA9 508 aaKnown RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 USP13Q92995 863 aaPredicted RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 COMMD8Q9NX08 183 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 MSRAQ9UJ68 235 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 SLC30A1Q9Y6M5 507 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 NLRC5Q86WI3 1866 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 NEMP2A6NFY4 417 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 KDELR3O43731 214 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 TYROBPO43914 113 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 SRP72O76094 671 aaKnown RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 NNMTP40261 264 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 MAGEA3P43357 314 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 MAGEA6P43360 314 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 CDKN1CP49918 316 aaPredicted RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 TAS2R39P59534 338 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 MARK2Q7KZI7 788 aaKnown RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 SDCCAG8Q86SQ7 713 aaPredicted RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 ZNF683Q8IZ20 524 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 RFWD2Q8NHY2 731 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 GABPB2Q8TAK5 448 aaPredicted RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 ARRDC2Q8TBH0 407 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 OVCA2Q8WZ82 227 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 PBX4Q9BYU1 374 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 POLR3BQ9NW08 1133 aaPredicted RBP11.22□□□□□ -0.61
PEX1-208ENST00000484913 FNIP2Q9P278 1114 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 SLC25A13Q9UJS0 675 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 PKP3Q9Y446 797 aa11.22□□□□□ -0.61
PEX1-208ENST00000484913 GLRA3O75311 464 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 NDST3O95803 873 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 CCR10P46092 362 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 CLCN4P51793 760 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 TRAF2Q12933 501 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 CYTH1Q15438 398 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 DENND5AQ6IQ26 1287 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 KDELC1Q6UW63 502 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 RANBP10Q6VN20 620 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 RMDN2Q96LZ7 410 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 ADGRE3Q9BY15 652 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 VPS45Q9NRW7 570 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 YBX2Q9Y2T7 364 aaKnown RBP11.21□□□□□ -0.61
PEX1-208ENST00000484913 GREB1Q4ZG55 1949 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 IGLV3-10A0A075B6K4 115 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 KPNA3O00505 521 aaPredicted RBP11.21□□□□□ -0.61
PEX1-208ENST00000484913 HLA-EP13747 358 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 ARFIP2P53365 341 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 ALDH18A1P54886 795 aaKnown RBP11.21□□□□□ -0.61
PEX1-208ENST00000484913 UGP2Q16851 508 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 CHST9Q7L1S5 443 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 NXNL1Q96CM4 212 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 TRMT2BQ96GJ1 504 aaKnown RBP11.21□□□□□ -0.61
PEX1-208ENST00000484913 ZNF317Q96PQ6 595 aaPredicted RBP11.21□□□□□ -0.61
PEX1-208ENST00000484913 KIAA1522Q9P206 1035 aaPredicted RBP11.21□□□□□ -0.61
PEX1-208ENST00000484913 ARMCX1Q9P291 453 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 ACOT9Q9Y305 439 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 PLLPQ9Y342 182 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 COL4A6Q14031 1691 aa11.21□□□□□ -0.61
PEX1-208ENST00000484913 PTPRDP23468 1912 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 GOLGA8QA0A0J9YX86 632 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 HMX2A2RU54 273 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 GOLGA8OA6NCC3 632 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 GOLGA8NF8WBI6 632 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 AP3B1O00203 1094 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 TM9SF1O15321 606 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 CLASP2O75122 1294 aaKnown RBP11.21□□□□□ -0.62
PEX1-208ENST00000484913 NCF2P19878 526 aaPredicted RBP11.21□□□□□ -0.62
PEX1-208ENST00000484913 MC4RP32245 332 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 LIMK2P53671 638 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 HTRA4P83105 476 aaPredicted RBP11.21□□□□□ -0.62
PEX1-208ENST00000484913 TSTA3Q13630 321 aaPredicted RBP11.21□□□□□ -0.62
PEX1-208ENST00000484913 PDK4Q16654 411 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 DET1Q7L5Y6 550 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 MYLK4Q86YV6 388 aaPredicted RBP11.21□□□□□ -0.62
PEX1-208ENST00000484913 YAF2Q8IY57 180 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 CATSPERZQ9NTU4 200 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 DUS2Q9NX74 493 aaKnown RBP11.21□□□□□ -0.62
PEX1-208ENST00000484913 DNAJC16Q9Y2G8 782 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 ACTL7BQ9Y614 415 aa11.21□□□□□ -0.62
PEX1-208ENST00000484913 PRPF4O43172 522 aaKnown RBP eCLIP11.2□□□□□ -0.62
PEX1-208ENST00000484913 SNX3O60493 162 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 UBOX5O94941 541 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 CRTAMO95727 393 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 FGF1P05230 155 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 CCDC166P0CW27 439 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 CPA3P15088 417 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 TSHRP16473 764 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 HADHAP40939 763 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 PPP3CCP48454 512 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 PLEKHG6Q3KR16 790 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 ATG16L1Q676U5 607 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 LYSMD3Q7Z3D4 306 aa11.2□□□□□ -0.62
PEX1-208ENST00000484913 TMEM135Q86UB9 458 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms