RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CXorf40AQ8TE69 158 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 CINPQ9BW66 212 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-239ENST00000483086 CLPBQ9H078 707 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.17□□□□□ -0.463e-8■■□□□ 13.7
HDLBP-239ENST00000483086 TRABD2BA6NFA1 517 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 K7ESM1 405 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 MYO1FO00160 1098 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 FPGTO14772 594 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 SCAMP1O15126 338 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 HTRA2O43464 458 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-239ENST00000483086 MAGEC1O60732 1142 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 CKMT2P17540 419 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 DESP17661 470 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 PTMSP20962 102 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 ACP1P24666 158 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 ARL4AP40617 200 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 RABIFP47224 123 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 LIG3P49916 1009 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 SCNN1BP51168 640 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 INSM1Q01101 510 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-239ENST00000483086 RAD51Q06609 339 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 NSUN2Q08J23 767 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDLBP-239ENST00000483086 TRAF2Q12933 501 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 ZNF211Q13398 564 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-239ENST00000483086 TMCO4Q5TGY1 634 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 TMCO3Q6UWJ1 677 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 PARGQ86W56 976 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 PROSER1Q86XN7 944 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 OR8K1Q8NGG5 319 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 HCAR2Q8TDS4 363 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 RAPGEF5Q92565 580 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 FAF2Q96CS3 445 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 APOLD1Q96LR9 279 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 ZNF641Q96N77 438 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-239ENST00000483086 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 MGME1Q9BQP7 344 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 LRRC61Q9BV99 259 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 NOD2Q9HC29 1040 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 CTTNBP2NLQ9P2B4 639 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 TFR2Q9UP52 801 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 ATP8A1Q9Y2Q0 1164 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 PCDHGC4Q9Y5F7 938 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 PCDHGA1Q9Y5H4 931 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 SCN8AQ9UQD0 1980 aa12.16□□□□□ -0.46
HDLBP-239ENST00000483086 ATMQ13315 3056 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 SSU72P8A0A1W2PR75 194 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 C3orf70A6NLC5 250 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-239ENST00000483086 LHCGRP22888 699 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 ZNF135P52742 658 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-239ENST00000483086 GBE1Q04446 702 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 C1orf61Q13536 156 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 RFTN1Q14699 578 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-239ENST00000483086 TCEA2Q15560 299 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 DEFB133Q30KQ1 61 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 INAVAQ3KP66 663 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 BRAT1Q6PJG6 821 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 LIPIQ6XZB0 460 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 RFLNAQ6ZTI6 216 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 DPPA4Q7L190 304 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 SFTPA2Q8IWL1 248 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 LZTR1Q8N653 840 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 TEX26Q8N6G2 289 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 IFT43Q96FT9 208 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 ZNF599Q96NL3 588 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 ATP13A3Q9H7F0 1226 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 NHEJ1Q9H9Q4 299 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-239ENST00000483086 B4GALT6Q9UBX8 382 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 SEPT3Q9UH03 358 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 HYOU1Q9Y4L1 999 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 OR1A2Q9Y585 309 aa12.15□□□□□ -0.46
HDLBP-239ENST00000483086 TMEM8BA6NDV4 472 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 TMEM110-MUSTN1A8MSY1 372 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 PCCBP05166 539 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 PDHA1P08559 390 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 H2AFZP0C0S5 128 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 TMEM253P0C7T8 217 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 CKMT1AP12532 417 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 JUNDP17535 347 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 SERPINA4P29622 427 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 SSR1P43307 286 aaKnown RBP12.14□□□□□ -0.47
HDLBP-239ENST00000483086 BCL2L1Q07817 233 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 CYP4F3Q08477 520 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 ELP6Q0PNE2 266 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 GALNT2Q10471 571 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 TARDBPQ13148 414 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDLBP-239ENST00000483086 KRT81Q14533 505 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 INPP5AQ14642 412 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 PAFAH1B3Q15102 231 aaKnown RBP12.14□□□□□ -0.47
HDLBP-239ENST00000483086 AGERQ15109 404 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 ALG11Q2TAA5 492 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 ANKRD20A8PQ5CZ79 823 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 H2AFVQ71UI9 128 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 TSPAN33Q86UF1 283 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 ZSCAN30Q86W11 494 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 DCP2Q8IU60 420 aaKnown RBP12.14□□□□□ -0.47
HDLBP-239ENST00000483086 PHACTR4Q8IZ21 702 aa12.14□□□□□ -0.47
HDLBP-239ENST00000483086 CBARPQ8N350 705 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms