RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 NSMCE3Q96MG7 304 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 LENG8Q96PV6 779 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-214ENST00000482733 VAT1Q99536 393 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 C1QTNF7Q9BXJ2 289 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 SEPT10Q9P0V9 454 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 PHTF1Q9UMS5 762 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 ITM2BQ9Y287 266 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 ANKRD6Q9Y2G4 727 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 PCDHB9Q9Y5E1 797 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 RAI2Q9Y5P3 530 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 HS3ST3A1Q9Y663 406 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 CFAP54Q96N23 3096 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 A0A1W2PR77 199 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 IGLON5A6NGN9 336 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 C4orf47A7E2U8 309 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 CDX4O14627 284 aaPredicted RBP16.7■□□□□ 0.26
HMGN1-214ENST00000482733 ZSCAN12O43309 604 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 TM7SF2O76062 418 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 PGLSO95336 258 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 CPP00450 1065 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 PRLRP16471 622 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 MMP12P39900 470 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 FAM193AP78312 1265 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 DSC2Q02487 901 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 TRAF2Q12933 501 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 KIF19Q2TAC6 998 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 MEI1Q5TIA1 1274 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 ZC3H18Q86VM9 953 aaKnown RBP16.7■□□□□ 0.26
HMGN1-214ENST00000482733 MINDY1Q8N5J2 469 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 CNTD1Q8N815 330 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 TTC13Q8NBP0 860 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 TMEM145Q8NBT3 493 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 DENND6BQ8NEG7 585 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 ARRDC2Q8TBH0 407 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 KLK6Q92876 244 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 QKIQ96PU8 341 aaKnown RBP eCLIP16.7■□□□□ 0.26
HMGN1-214ENST00000482733 RTKNQ9BST9 563 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 FSCN3Q9NQT6 498 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 GGT7Q9UJ14 662 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 CEP192Q8TEP8 1941 aa16.7■□□□□ 0.26
HMGN1-214ENST00000482733 H7C0C1 242 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 TLR4O00206 839 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 DFNA5O60443 496 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 MMP20O60882 483 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 OPHN1O60890 802 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 PAK4O96013 591 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 CYP2A6P11509 494 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 ITIH2P19823 946 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 PTPN3P26045 913 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 CTSKP43235 329 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 ATP5OP48047 213 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 RPL26P61254 145 aaKnown RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 OTUD4Q01804 1114 aaKnown RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 NIPAL4Q0D2K0 466 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 ZNF211Q13398 564 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 SLC14A2Q15849 920 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 DPPA4Q7L190 304 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 CDKL3Q8IVW4 592 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 ACTL9Q8TC94 416 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 HTR3CQ8WXA8 447 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 TEKT5Q96M29 485 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 AGAP3Q96P47 875 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 WRAP53Q9BUR4 548 aaKnown RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 TDRD1Q9BXT4 1180 aaKnown RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 SLC25A51Q9H1U9 297 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 DNAAF2Q9NVR5 837 aaKnown RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 DLL3Q9NYJ7 618 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 RPL26L1Q9UNX3 145 aaKnown RBP16.69■□□□□ 0.26
HMGN1-214ENST00000482733 GON4LQ3T8J9 2241 aa16.69■□□□□ 0.26
HMGN1-214ENST00000482733 FPGTO14772 594 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 WNT9AO14904 365 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 FZD6O60353 706 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 WNT1P04628 370 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 CD86P42081 329 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 LIG3P49916 1009 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 BNC1Q01954 994 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 SLC14A1Q13336 389 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 FGL2Q14314 439 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 PUM1Q14671 1186 aaKnown RBP eCLIP16.68■□□□□ 0.26
HMGN1-214ENST00000482733 HLA-BQ31612 363 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 AADACL2Q6P093 401 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 USP45Q70EL2 814 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 DCP2Q8IU60 420 aaKnown RBP16.68■□□□□ 0.26
HMGN1-214ENST00000482733 RMDN1Q96DB5 314 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 KLHDC7BQ96G42 594 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 CARD9Q9H257 536 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 KCNF1Q9H3M0 494 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 GAREM1Q9H706 876 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 GLOD4Q9HC38 313 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 GDF3Q9NR23 364 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 TRHDEQ9UKU6 1024 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 PPIL1Q9Y3C6 166 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 SNX11Q9Y5W9 270 aa16.68■□□□□ 0.26
HMGN1-214ENST00000482733 A6NNZ2 444 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 LZTS3O60299 673 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 PRKCGP05129 697 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 ZNF883P0CG24 379 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 C6P13671 934 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms