RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 AP1S1P61966 158 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 FAM193AP78312 1265 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SEMG2Q02383 582 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 GRIK2Q13002 908 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SGCGQ13326 291 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 STAT4Q14765 748 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 NR6A1Q15406 480 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SLC45A4Q5BKX6 768 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 FAM182AQ5T1J6 154 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SEL1L3Q68CR1 1132 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SLC9A4Q6AI14 798 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 ERAP2Q6P179 960 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SLC23A3Q6PIS1 610 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 ZC3H18Q86VM9 953 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 PGBD5Q8N414 524 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 EXD1Q8NHP7 514 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 NETO1Q8TDF5 533 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 P3H4Q92791 437 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SKA1Q96BD8 255 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 FEM1CQ96JP0 617 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 PSKH2Q96QS6 385 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 TUBGCP5Q96RT8 1024 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 CEP41Q9BYV8 373 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 CPEB1Q9BZB8 566 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SLC6A16Q9GZN6 736 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 CA5BQ9Y2D0 317 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 PCDHGC4Q9Y5F7 938 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 SLCO1B1Q9Y6L6 691 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 CAPN6Q9Y6Q1 641 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 CHD8Q9HCK8 2581 aa10.09□□□□□ -0.79
SPTLC1-206ENST00000482632 hCG_1818297A0A087WSY0 165 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 IGLON5A6NGN9 336 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 A8MX80 341 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 H7C0C1 242 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 MMP20O60882 483 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 OPHN1O60890 802 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CPP00450 1065 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CCNYL3P0C7X3 344 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 TIMP2P16035 220 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 PECAM1P16284 738 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 TGM2P21980 687 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CD38P28907 300 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 ATP5OP48047 213 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 GRIA4P48058 902 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CSNK1DP48730 415 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 EPHB1P54762 984 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 RPS21P63220 83 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 RACK1P63244 317 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CCZ1BP86790 482 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CCZ1P86791 482 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 DSC2Q02487 901 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 ELP6Q0PNE2 266 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 ZNF211Q13398 564 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 HNRNPDQ14103 355 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 PEAR1Q5VY43 1037 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 DENND2CQ68D51 928 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 NAPEPLDQ6IQ20 393 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 KIAA1161Q6NSJ0 714 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 AADACL2Q6P093 401 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 BRAT1Q6PJG6 821 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 BZW1Q7L1Q6 419 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 PTAR1Q7Z6K3 402 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 NT5DC3Q86UY8 548 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 TRIM69Q86WT6 500 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 VSIG1Q86XK7 387 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 MINDY1Q8N5J2 469 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 LRRC57Q8N9N7 239 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 RAB7BQ96AH8 199 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 HDAC11Q96DB2 347 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 RMDN1Q96DB5 314 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 ZNF641Q96N77 438 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 ALS2CR12Q96Q35 445 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 NUDCD1Q96RS6 583 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 SEMA3CQ99985 751 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 MGME1Q9BQP7 344 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 POLR1EQ9GZS1 481 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 GAREM1Q9H706 876 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 EBF2Q9HAK2 575 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 NOD2Q9HC29 1040 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CAPN10Q9HC96 672 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 PCDH12Q9NPG4 1184 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 TPX2Q9ULW0 747 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 ZFR2Q9UPR6 939 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 ANKRD6Q9Y2G4 727 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 COQ6Q9Y2Z9 468 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 PCDHA3Q9Y5H8 950 aa10.08□□□□□ -0.8
SPTLC1-206ENST00000482632 CACNA1EQ15878 2313 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 DCDC2BA2VCK2 349 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 MIF4GDA9UHW6 222 aaKnown RBP10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 F5H423 210 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 KCNK3O14649 394 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 TSPAN6O43657 245 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 AP1G1O43747 822 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 CER1O95813 267 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 PEX11BO96011 259 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 HLA-DQB2P05538 268 aa10.07□□□□□ -0.8
SPTLC1-206ENST00000482632 HNRNPA2B1P22626 353 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms