RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SDCCAG3Q96C92 435 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SPATA13Q96N96 652 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 FAM118BQ9BPY3 351 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 RHOXF2Q9BQY4 288 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 HTATIP2Q9BUP3 242 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CACNG6Q9BXT2 260 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 TEX101Q9BY14 249 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 NYXQ9GZU5 481 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SLC5A7Q9GZV3 580 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 COQ10BQ9H8M1 238 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SCPEP1Q9HB40 452 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 FANCEQ9HB96 536 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 IL1RAPL2Q9NP60 686 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 PALMDQ9NP74 551 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 G6PC2Q9NQR9 355 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 INTS13Q9NVM9 706 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 ZSCAN32Q9NX65 697 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 TAS2R10Q9NYW0 307 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 VSX1Q9NZR4 365 aaPredicted RBP4.24□□□□□ -1.73
VPS41-212ENST00000482217 RCOR1Q9UKL0 485 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 BAG5Q9UL15 447 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 SHOC2Q9UQ13 582 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 EXOC6BQ9Y2D4 811 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 DERAQ9Y315 318 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 NOX1Q9Y5S8 564 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 CAPN7Q9Y6W3 813 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 COL15A1P39059 1388 aa4.24□□□□□ -1.73
VPS41-212ENST00000482217 TRAV6A0A075B6T7 132 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 LIPT2A6NK58 231 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ENO4A6NNW6 628 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 TMEM233B4DJY2 109 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 TNPO2O14787 897 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 TNFSF14O43557 240 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SPOPO43791 374 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 FAM20BO75063 409 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 VPS4BO75351 444 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 NCR1O76036 304 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 OR2C1O95371 312 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 CYC1P08574 325 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 FGF4P08620 206 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 FDPSP14324 419 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 ZNF3P17036 446 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 GALP22466 123 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 LRPAP1P30533 357 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 MCM5P33992 734 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 GDF5P43026 501 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 PTGER3P43115 390 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 RARSP54136 660 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 RPS7P62081 194 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 PRKCEQ02156 737 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 PTP4A2Q12974 167 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 MTX1Q13505 466 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 DYRK1AQ13627 763 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 GALNT3Q14435 633 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 CYP2A13Q16696 494 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 CCDC142Q17RM4 750 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 MDH1BQ5I0G3 518 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 C9orf152Q5JTZ5 239 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 KCNT1Q5JUK3 1230 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 DCAF12L1Q5VU92 463 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SFMBT2Q5VUG0 894 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 FCRLBQ6BAA4 426 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SP5Q6BEB4 398 aaPredicted RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 TTI2Q6NXR4 508 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 NOTUMQ6P988 496 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 LAYNQ6UX15 382 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SLC30A10Q6XR72 485 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 KIAA0408Q6ZU52 694 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 CHST3Q7LGC8 479 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 CACNA2D4Q7Z3S7 1137 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SPATA24Q86W54 205 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 YAF2Q8IY57 180 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 GBP7Q8N8V2 638 aaPredicted RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 NSUN7Q8NE18 718 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 NFKBIDQ8NI38 313 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 CCDC110Q8TBZ0 833 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 URGCPQ8TCY9 931 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ST7LQ8TDW4 575 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ACMSDQ8TDX5 336 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ZNF483Q8TF39 744 aaPredicted RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 SLC25A43Q8WUT9 341 aaPredicted RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 ZBTB9Q96C00 473 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 MYEOVQ96EZ4 313 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ALG14Q96F25 216 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 LRIG1Q96JA1 1093 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ATP6V1G3Q96LB4 118 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SLC46A1Q96NT5 459 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 RAB3IPQ96QF0 476 aaPredicted RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 RUFY1Q96T51 708 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 MESP1Q9BRJ9 268 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 TUBB6Q9BUF5 446 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ZNF747Q9BV97 191 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 EIF2AQ9BY44 585 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 MS4A7Q9GZW8 240 aaPredicted RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 CHST8Q9H2A9 424 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SMARCAD1Q9H4L7 1026 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 ZNF768Q9H5H4 540 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 DENND2DQ9H6A0 471 aaPredicted RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 GALNT9Q9HCQ5 603 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 XPNPEP3Q9NQH7 507 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms