RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 EFCAB7A8K855 629 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 RHPN2P1A8MT19 583 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 PCCBP05166 539 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 TIMP2P16035 220 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 XPAP23025 273 aaPredicted RBP15.07■□□□□ 0
HDAC6-224ENST00000481929 OAS2P29728 719 aaKnown RBP15.07■□□□□ 0
HDAC6-224ENST00000481929 CSTF2P33240 577 aaKnown RBP eCLIP15.07■□□□□ 0
HDAC6-224ENST00000481929 SULT1E1P49888 294 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 PMS1P54277 932 aaKnown RBP15.07■□□□□ 0
HDAC6-224ENST00000481929 MC1RQ01726 317 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 LRRC63Q05C16 580 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 DEUP1Q05D60 604 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 ELP6Q0PNE2 266 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 CCDC40Q4G0X9 1142 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 TMEM52BQ4KMG9 183 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 KCTD16Q68DU8 428 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 CAPRIN2Q6IMN6 1127 aaKnown RBP15.07■□□□□ 0
HDAC6-224ENST00000481929 IRF2BP1Q8IU81 584 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 EHBP1Q8NDI1 1231 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 OR1E3Q8WZA6 343 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 VOPP1Q96AW1 172 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 ACP6Q9NPH0 428 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 SLC39A1Q9NY26 324 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 DAAM1Q9Y4D1 1078 aa15.07■□□□□ 0
HDAC6-224ENST00000481929 DOCK4Q8N1I0 1966 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 LRBAP50851 2863 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 TRIM49BA6NDI0 452 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 F9P00740 461 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 TFE3P19532 575 aaPredicted RBP15.06■□□□□ 0
HDAC6-224ENST00000481929 NR1D1P20393 614 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 GNLYP22749 145 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 ACVRL1P37023 503 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 LIMK2P53671 638 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 MAZP56270 477 aaKnown RBP15.06■□□□□ 0
HDAC6-224ENST00000481929 SNX16P57768 344 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 RAB15P59190 212 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 SLC6A3Q01959 620 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 RAD51Q06609 339 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 MTM1Q13496 603 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 ATXN7L2Q5T6C5 722 aaPredicted RBP15.06■□□□□ 0
HDAC6-224ENST00000481929 DCAF12Q5T6F0 453 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 HEATR4Q86WZ0 1026 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 PASD1Q8IV76 773 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 NLGN4XQ8N0W4 816 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 WDTC1Q8N5D0 677 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 ZNF397Q8NF99 534 aaPredicted RBP15.06■□□□□ 0
HDAC6-224ENST00000481929 NLGN4YQ8NFZ3 816 aaPredicted RBP15.06■□□□□ 0
HDAC6-224ENST00000481929 OR56A4Q8NGH8 313 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 GDAP1L1Q96MZ0 367 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 TMEM168Q9H0V1 697 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 SYNCQ9H7C4 482 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 PRDM8Q9NQV8 689 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 TMEM51Q9NW97 253 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 RMND1Q9NWS8 449 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.06■□□□□ 0
HDAC6-224ENST00000481929 DKK3Q9UBP4 350 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 SRPK3Q9UPE1 567 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 C2CD3Q4AC94 2353 aa15.06■□□□□ 0
HDAC6-224ENST00000481929 FAM237AA0A1B0GTK4 181 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 A1L4Q6 167 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 B4E171 279 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 MKRN2OSH3BPM6 223 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 CACNB4O00305 520 aaPredicted RBP15.05■□□□□ -0
HDAC6-224ENST00000481929 ERBB2P04626 1255 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 KELP23276 732 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 MAP4P27816 1152 aaKnown RBP15.05■□□□□ -0
HDAC6-224ENST00000481929 TSPAN7P41732 249 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 SUOXP51687 545 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 COPB1P53618 953 aaKnown RBP15.05■□□□□ -0
HDAC6-224ENST00000481929 KIAA1024LP59773 190 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 BIRC2Q13490 618 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 NR1D2Q14995 579 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 COBLL1Q53SF7 1204 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 ZNF438Q7Z4V0 828 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 FAM129CQ86XR2 697 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 NRSN1Q8IZ57 195 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 GALNT11Q8NCW6 608 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 OR4D9Q8NGE8 314 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 STARD8Q92502 1023 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 PGAP3Q96FM1 320 aaPredicted RBP15.05■□□□□ -0
HDAC6-224ENST00000481929 CCDC34Q96HJ3 373 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 TEFMQ96QE5 360 aaKnown RBP15.05■□□□□ -0
HDAC6-224ENST00000481929 FGF22Q9HCT0 170 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 UBE2TQ9NPD8 197 aaPredicted RBP15.05■□□□□ -0
HDAC6-224ENST00000481929 PILRAQ9UKJ1 303 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 HPCAL4Q9UM19 191 aa15.05■□□□□ -0
HDAC6-224ENST00000481929 ARHGEF17Q96PE2 2063 aaPredicted RBP15.05■□□□□ -0
HDAC6-224ENST00000481929 SPENQ96T58 3664 aaKnown RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 LOC101059948A0A1B0GTJ6 334 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 TMEM202A6NGA9 273 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 TCN2P20062 427 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 CD1CP29017 333 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 RNASE9P60153 205 aaKnown RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 ARTNQ5T4W7 220 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 ZNF658Q5TYW1 1059 aaPredicted RBP15.04■□□□□ -0
HDAC6-224ENST00000481929 ANKS6Q68DC2 871 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 ZNF787Q6DD87 383 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 TCTN3Q6NUS6 607 aa15.04■□□□□ -0
HDAC6-224ENST00000481929 C16orf46Q6P387 395 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms