RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 ZSWIM9Q86XI8 627 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 PDCD6IPQ8WUM4 868 aaKnown RBP20.86■□□□□ 0.93
VPS16-207ENST00000481812 CPT1BQ92523 772 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 SCRN2Q96FV2 425 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 SRPK1Q96SB4 655 aaKnown RBP20.86■□□□□ 0.93
VPS16-207ENST00000481812 TBL1YQ9BQ87 522 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 TRIM51Q9BSJ1 452 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 LRRC1Q9BTT6 524 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 KDM4CQ9H3R0 1056 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 TPX2Q9ULW0 747 aaKnown RBP20.86■□□□□ 0.93
VPS16-207ENST00000481812 EML5Q05BV3 1969 aa20.86■□□□□ 0.93
VPS16-207ENST00000481812 ZNF318Q5VUA4 2279 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 A0A1W2PP55 124 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 EFCAB8A8MWE9 144 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 AP3B1O00203 1094 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 AXIN1O15169 862 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 FGF1P05230 155 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 APRTP07741 180 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 LMAN1P49257 510 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 EPHB1P54762 984 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 AGBL4Q5VU57 503 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 HOOK3Q86VS8 718 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 WDR5BQ86VZ2 330 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 PPIL6Q8IXY8 311 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 PAF1Q8N7H5 531 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 BBOF1Q8ND07 529 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 SNF8Q96H20 258 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 MCCC1Q96RQ3 725 aaPredicted RBP20.85■□□□□ 0.93
VPS16-207ENST00000481812 LYSMD1Q96S90 227 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 FICDQ9BVA6 458 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 NEUROG2Q9H2A3 272 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 SGK2Q9HBY8 427 aa20.85■□□□□ 0.93
VPS16-207ENST00000481812 A0A0J9YYE9 177 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 BHMG1C9JSJ3 638 aaPredicted RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 AREL1O15033 823 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 RNASEH2AO75792 299 aaKnown RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 SLU7O95391 586 aaKnown RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 AGTP01019 485 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 TRBC1P01850 177 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 ATXN1LP0C7T5 689 aaKnown RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 ITIH2P19823 946 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 XPAP23025 273 aaPredicted RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 SARNPP82979 210 aaKnown RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 ELP6Q0PNE2 266 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 QPCTQ16769 361 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 POM121L1PQ3SYA9 428 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 RNASEH2BQ5TBB1 312 aaKnown RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 DENND5AQ6IQ26 1287 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 CACUL1Q86Y37 369 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 TAB3Q8N5C8 712 aaPredicted RBP20.84■□□□□ 0.93
VPS16-207ENST00000481812 NAT8LQ8N9F0 302 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 MCUQ8NE86 351 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 SEC14L1Q92503 715 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 NELL1Q92832 810 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 RMDN1Q96DB5 314 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 WHRNQ9P202 907 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 SERGEFQ9UGK8 458 aa20.84■□□□□ 0.93
VPS16-207ENST00000481812 RIOK3O14730 519 aaKnown RBP20.83■□□□□ 0.93
VPS16-207ENST00000481812 PLRG1O43660 514 aaKnown RBP20.83■□□□□ 0.93
VPS16-207ENST00000481812 SEC31AO94979 1220 aaKnown RBP20.83■□□□□ 0.93
VPS16-207ENST00000481812 CSTF1Q05048 431 aaKnown RBP20.83■□□□□ 0.93
VPS16-207ENST00000481812 MORF4L2Q15014 288 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 SIRPB2Q5JXA9 342 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 ERAP2Q6P179 960 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 NEK5Q6P3R8 708 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 USP45Q70EL2 814 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 LONP2Q86WA8 852 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 LPCAT1Q8NF37 534 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 GANCQ8TET4 914 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 FRMD8Q9BZ67 464 aaPredicted RBP20.83■□□□□ 0.93
VPS16-207ENST00000481812 BTBD1Q9H0C5 482 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 MAGEE1Q9HCI5 957 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 FADS3Q9Y5Q0 445 aa20.83■□□□□ 0.93
VPS16-207ENST00000481812 NUMA1Q14980 2115 aa20.83■□□□□ 0.92
VPS16-207ENST00000481812 CAPN8A6NHC0 703 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 GALR2O43603 387 aaPredicted RBP20.82■□□□□ 0.92
VPS16-207ENST00000481812 TSPAN6O43657 245 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 CYP2A6P11509 494 aaPredicted RBP20.82■□□□□ 0.92
VPS16-207ENST00000481812 MLNP12872 115 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 ABL2P42684 1182 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 RPL21P46778 160 aaKnown RBP20.82■□□□□ 0.92
VPS16-207ENST00000481812 TAS2R38P59533 333 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 CDH17Q12864 832 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 SPARCL1Q14515 664 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 MAP7D1Q3KQU3 841 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 TMEM52BQ4KMG9 183 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 USP39Q53GS9 565 aaKnown RBP20.82■□□□□ 0.92
VPS16-207ENST00000481812 IZUMO3Q5VZ72 239 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 KDELC2Q7Z4H8 507 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 TPSD1Q9BZJ3 242 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 PREBQ9HCU5 417 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 PCDH12Q9NPG4 1184 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 CASS4Q9NQ75 786 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 WSB2Q9NYS7 404 aaPredicted RBP20.82■□□□□ 0.92
VPS16-207ENST00000481812 HACD3Q9P035 362 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 SHOC2Q9UQ13 582 aa20.82■□□□□ 0.92
VPS16-207ENST00000481812 IGHV1OR15-9A0A0B4J2B8 117 aa20.81■□□□□ 0.92
VPS16-207ENST00000481812 H0Y858 1186 aa20.81■□□□□ 0.92
VPS16-207ENST00000481812 PLK4O00444 970 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms