RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 HPS6Q86YV9 775 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 CCDC65Q8IXS2 484 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 SCML4Q8N228 414 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 FDCSPQ8NFU4 85 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 ATL2Q8NHH9 583 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 CLEC4CQ8WTT0 213 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 ZDHHC1Q8WTX9 485 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 THAP4Q8WY91 577 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 STAMBPL1Q96FJ0 436 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 BTN2A3PQ96KV6 586 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 PRMT1Q99873 361 aaKnown RBP11.98□□□□□ -0.49
USP11-208ENST00000480104 HEPHQ9BQS7 1158 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 LLPHQ9BRT6 129 aaKnown RBP11.98□□□□□ -0.49
USP11-208ENST00000480104 APOOQ9BUR5 198 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 ZSCAN16Q9H4T2 348 aaPredicted RBP11.98□□□□□ -0.49
USP11-208ENST00000480104 ACTL8Q9H568 366 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 ZDHHC6Q9H6R6 413 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 SPATS2LQ9NUQ6 558 aaKnown RBP11.98□□□□□ -0.49
USP11-208ENST00000480104 PDP2Q9P2J9 529 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 TSPAN16Q9UKR8 245 aa11.98□□□□□ -0.49
USP11-208ENST00000480104 COPG1Q9Y678 874 aaKnown RBP11.98□□□□□ -0.49
USP11-208ENST00000480104 PRRC2AP48634 2157 aaKnown RBP11.97□□□□□ -0.49
USP11-208ENST00000480104 AREL1O15033 823 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 GRID2O43424 1007 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 GABBR2O75899 941 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 ECEL1O95672 775 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 F9P00740 461 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 FYNP06241 537 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 RGS7P49802 495 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 CLCN6P51797 869 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 CCNHP51946 323 aaPredicted RBP11.97□□□□□ -0.49
USP11-208ENST00000480104 KRT83P78385 493 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 FOXM1Q08050 763 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 BIRC2Q13490 618 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 LRRC14Q15048 493 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 UGT8Q16880 541 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 ZNF630Q2M218 657 aaPredicted RBP11.97□□□□□ -0.49
USP11-208ENST00000480104 WSCD2Q2TBF2 565 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 BNC2Q6ZN30 1099 aaPredicted RBP11.97□□□□□ -0.49
USP11-208ENST00000480104 CXXC5Q7LFL8 322 aaKnown RBP11.97□□□□□ -0.49
USP11-208ENST00000480104 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 UBA3Q8TBC4 463 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 ZNF507Q8TCN5 953 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 ITLN2Q8WWU7 325 aaPredicted RBP11.97□□□□□ -0.49
USP11-208ENST00000480104 PATE1Q8WXA2 126 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 IRGQQ8WZA9 623 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 C2orf49Q9BVC5 232 aaPredicted RBP11.97□□□□□ -0.49
USP11-208ENST00000480104 IMPG2Q9BZV3 1241 aa11.97□□□□□ -0.49
USP11-208ENST00000480104 MXRA5Q9NR99 2828 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 TMEM202A6NGA9 273 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 E2F3O00716 465 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 FGF1P05230 155 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 TIMP2P16035 220 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 GKP32189 559 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 STAT1P42224 750 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 DNA2P51530 1060 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 ADAM9Q13443 819 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 INPP5AQ14642 412 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 CRB2Q5IJ48 1285 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 RRAGBQ5VZM2 374 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 FBXL22Q6P050 247 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 PRIMA1Q86XR5 153 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 C12orf56Q8IXR9 622 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 CT55Q8WUE5 264 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 ARHGEF26Q96DR7 871 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 RPRD1AQ96P16 312 aaPredicted RBP11.96□□□□□ -0.49
USP11-208ENST00000480104 RUFY1Q96T51 708 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 WRAP53Q9BUR4 548 aaKnown RBP11.96□□□□□ -0.49
USP11-208ENST00000480104 B3GNT3Q9Y2A9 372 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 COQ6Q9Y2Z9 468 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 NEU2Q9Y3R4 380 aa11.96□□□□□ -0.49
USP11-208ENST00000480104 FAM221AA4D161 298 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 F5H423 210 aaPredicted RBP11.95□□□□□ -0.5
USP11-208ENST00000480104 PPM1DO15297 605 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 KCNN4O15554 427 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 PTGIRP43119 386 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 PPM1FP49593 454 aaPredicted RBP11.95□□□□□ -0.5
USP11-208ENST00000480104 RPS18P62269 152 aaKnown RBP11.95□□□□□ -0.5
USP11-208ENST00000480104 SNRPFP62306 86 aaKnown RBP11.95□□□□□ -0.5
USP11-208ENST00000480104 LTBQ06643 244 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 IL10RAQ13651 578 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 TGIF2LYQ8IUE0 185 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 OR56A4Q8NGH8 313 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 OR6K2Q8NGY2 324 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 INPP5DQ92835 1189 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 CISHQ9NSE2 258 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 SIDT1Q9NXL6 827 aaKnown RBP11.95□□□□□ -0.5
USP11-208ENST00000480104 TFIP11Q9UBB9 837 aaKnown RBP11.95□□□□□ -0.5
USP11-208ENST00000480104 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 CCDC39Q9UFE4 941 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 TBC1D30Q9Y2I9 924 aa11.95□□□□□ -0.5
USP11-208ENST00000480104 A0A1B0GUH1 482 aa11.94□□□□□ -0.5
USP11-208ENST00000480104 A6NL46 340 aa11.94□□□□□ -0.5
USP11-208ENST00000480104 KCNU1A8MYU2 1149 aa11.94□□□□□ -0.5
USP11-208ENST00000480104 KIAA0754O94854 1291 aa11.94□□□□□ -0.5
USP11-208ENST00000480104 PCCBP05166 539 aa11.94□□□□□ -0.5
USP11-208ENST00000480104 STSP08842 583 aa11.94□□□□□ -0.5
USP11-208ENST00000480104 TRIM49P0CI25 452 aa11.94□□□□□ -0.5
USP11-208ENST00000480104 TRIM49CP0CI26 452 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms