RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ATE1O95260 518 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 ME2P23368 584 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 EDNRBP24530 442 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 AKAP5P24588 427 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 RPL10P27635 214 aaKnown RBP11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 PTPN9P43378 593 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 HSPA13P48723 471 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 NDST2P52849 883 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 NKX2-5P52952 324 aaPredicted RBP11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 PPP2R2BQ00005 443 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 PTK2BQ14289 1009 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 OXA1LQ15070 435 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 PIGGQ5H8A4 983 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 SYPL2Q5VXT5 272 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 SLC26A9Q7LBE3 791 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 SETD3Q86TU7 594 aaPredicted RBP11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 CLIP4Q8N3C7 705 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 PNPLA1Q8N8W4 532 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 CATSPER1Q8NEC5 780 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZNF486Q96H40 463 aaPredicted RBP11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 DHRS9Q9BPW9 319 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 NAT9Q9BTE0 207 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 FANCEQ9HB96 536 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 GOLGA2P5Q9HBQ8 144 aa11.14□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZCWPW2A0A1B0GU75 182 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 NEMP2A6NFY4 417 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 TAF4O00268 1085 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 EEF2KO00418 725 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 TNPO2O14787 897 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 KRT6AP02538 564 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 KRT6BP04259 564 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 CCDC159P0C7I6 412 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 HNRNPLP14866 589 aaKnown RBP eCLIP11.13□□□□□ -0.633e-9■■□□□ 12.8
LRRFIP1-211ENST00000478958 PRKCAP17252 672 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ACAT1P24752 427 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 NMBRP28336 390 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 BAG6P46379 1132 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZNF280AP59817 542 aaPredicted RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 GNA12Q03113 381 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 SPANXN3Q5MJ09 141 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 PLPPR4Q7Z2D5 763 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 SLC51BQ86UW2 128 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 RALGPS2Q86X27 583 aaPredicted RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 RNF135Q8IUD6 432 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 LILRB1Q8NHL6 650 aaPredicted RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 PEX13Q92968 403 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 TSNARE1Q96NA8 513 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 FAM49AQ9H0Q0 323 aaPredicted RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 OXSMQ9NWU1 459 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 GTSE1Q9NYZ3 720 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 CDYLQ9Y232 598 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 CPQQ9Y646 472 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 SCN1AP35498 2009 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 PTPRFP10586 1907 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 C1orf232A0A0U1RR37 186 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 A0A1W2PPW3 197 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 KCNU1A8MYU2 1149 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 IDH3BO43837 385 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 NR4A2P43354 598 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZNF135P52742 658 aaPredicted RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 P2RX3P56373 397 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 BST2Q10589 180 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 CTBP1Q13363 440 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 DGKDQ16760 1214 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 AGAP7PQ5VUJ5 663 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 PIGZQ86VD9 579 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ELMOD2Q8IZ81 293 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 TERB1Q8NA31 727 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 RP9Q8TA86 221 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ADAMTS16Q8TE57 1224 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 PPWD1Q96BP3 646 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 TRPV6Q9H1D0 765 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 CYP4F12Q9HCS2 524 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ARMC1Q9NVT9 282 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 ZNF112Q9UJU3 913 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 FZD10Q9ULW2 581 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 CDC14AQ9UNH5 594 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 SNX13Q9Y5W8 968 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 SNX10Q9Y5X0 201 aa11.13□□□□□ -0.63
LRRFIP1-211ENST00000478958 GRID2O43424 1007 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 SEC24DO94855 1032 aaPredicted RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 VAPBO95292 243 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 FKBP9O95302 570 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 H6PDO95479 791 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 ALOX5P09917 674 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 PTPN3P26045 913 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 GNL1P36915 607 aaPredicted RBP11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 GNG2P59768 71 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 PHC1P78364 1004 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 PRAMEP78395 509 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 HSPA14Q0VDF9 509 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 HFE2Q6ZVN8 426 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 IGFN1Q86VF2 1251 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 RIOX2Q8IUF8 465 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 SLC41A1Q8IVJ1 513 aa11.12□□□□□ -0.63
LRRFIP1-211ENST00000478958 FSTL5Q8N475 847 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms