RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 CDK4P11802 303 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 C6P13671 934 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 NME1P15531 152 aaKnown RBP16.12■□□□□ 0.17
CYTH3-206ENST00000478541 KDELR1P24390 212 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 IGFALSP35858 605 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 GARSP41250 739 aaKnown RBP16.12■□□□□ 0.17
CYTH3-206ENST00000478541 MMP13P45452 471 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 HNRNPKP61978 463 aaKnown RBP eCLIP16.12■□□□□ 0.17
CYTH3-206ENST00000478541 PDE1CQ14123 709 aaPredicted RBP16.12■□□□□ 0.17
CYTH3-206ENST00000478541 PTK2BQ14289 1009 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 TMPRSS7Q7RTY8 843 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 PGBD5Q8N414 524 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 OR4C6Q8NH72 309 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 MRFAP1L1Q96HT8 127 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 DNAJC28Q9NX36 388 aa16.12■□□□□ 0.17
CYTH3-206ENST00000478541 MAP1BP46821 2468 aaKnown RBP16.12■□□□□ 0.17
CYTH3-206ENST00000478541 TMEM8BA6NDV4 472 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 TMEM110-MUSTN1A8MSY1 372 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 C1QTNF9BB2RNN3 333 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 C1QTNF9P0C862 333 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 GIMD1P0DJR0 217 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 SLC1A1P43005 524 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 LIG3P49916 1009 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 ZNF211Q13398 564 aaPredicted RBP16.11■□□□□ 0.17
CYTH3-206ENST00000478541 LRRC14Q15048 493 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 IFI16Q16666 785 aaKnown RBP16.11■□□□□ 0.17
CYTH3-206ENST00000478541 PROX2Q3B8N5 592 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 TPRG1LQ5T0D9 272 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 LRRC38Q5VT99 294 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 TIGD7Q6NT04 549 aaPredicted RBP16.11■□□□□ 0.17
CYTH3-206ENST00000478541 DPPA4Q7L190 304 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 PQLC3Q8N755 202 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 MAML1Q92585 1016 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 TSGA13Q96PP4 275 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 RBSNQ9H1K0 784 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 SCUBE2Q9NQ36 999 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 MBNL1Q9NR56 388 aaKnown RBP16.11■□□□□ 0.17
CYTH3-206ENST00000478541 UCKL1Q9NWZ5 548 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 AMACRQ9UHK6 382 aa16.11■□□□□ 0.17
CYTH3-206ENST00000478541 EPG5Q9HCE0 2579 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 NEMP2A6NFY4 417 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 GOLGA8CPA6NN73 597 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 H3BM21 787 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 MATN3O15232 486 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 RFPL3O75679 317 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 CKMT2P17540 419 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 CCNCP24863 283 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 ACADVLP49748 655 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 PEX5P50542 639 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 ZNF75DP51815 510 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 THOP1P52888 689 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 HADHBP55084 474 aaKnown RBP16.1■□□□□ 0.17
CYTH3-206ENST00000478541 RALGDSQ12967 914 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 DNAJC3Q13217 504 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 ILKQ13418 452 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 IRF4Q15306 451 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 SMAD1Q15797 465 aaKnown RBP16.1■□□□□ 0.17
CYTH3-206ENST00000478541 ST3GAL2Q16842 350 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 ALG1LQ6GMV1 187 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 CCNI2Q6ZMN8 369 aaPredicted RBP16.1■□□□□ 0.17
CYTH3-206ENST00000478541 CCDC170Q8IYT3 715 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 GALNT15Q8N3T1 639 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 KDF1Q8NAX2 398 aaPredicted RBP16.1■□□□□ 0.17
CYTH3-206ENST00000478541 BTN2A2Q8WVV5 523 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 RAPGEF5Q92565 580 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 RNF157Q96PX1 679 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 NOD2Q9HC29 1040 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 NLGN3Q9NZ94 848 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 COQ6Q9Y2Z9 468 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 PCDHGC4Q9Y5F7 938 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 CSNK1G3Q9Y6M4 447 aa16.1■□□□□ 0.17
CYTH3-206ENST00000478541 LRP4O75096 1905 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 TTC24A2A3L6 582 aaPredicted RBP16.09■□□□□ 0.17
CYTH3-206ENST00000478541 TRIM38O00635 465 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 SCAMP1O15126 338 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 SIGLEC6O43699 453 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 PRKCGP05129 697 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 ALPPL2P10696 532 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 MX2P20592 715 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 CES1P23141 567 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 ACP1P24666 158 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 NFKBIAP25963 317 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 MAXP61244 160 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 EIF2B5Q13144 721 aaKnown RBP16.09■□□□□ 0.17
CYTH3-206ENST00000478541 WSCD2Q2TBF2 565 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 HS1BP3Q53T59 392 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 ZNF542PQ5EBM4 170 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 ZFYVE27Q5T4F4 411 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 LIPIQ6XZB0 460 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 KDM7AQ6ZMT4 941 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 MACC1Q6ZN28 852 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 PAF1Q8N7H5 531 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 ZNF548Q8NEK5 533 aaPredicted RBP16.09■□□□□ 0.17
CYTH3-206ENST00000478541 HDAC11Q96DB2 347 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 TBATAQ96M53 351 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 ANP32EQ9BTT0 268 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 DUSP23Q9BVJ7 150 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 POLR1EQ9GZS1 481 aaKnown RBP16.09■□□□□ 0.17
CYTH3-206ENST00000478541 NT5MQ9NPB1 228 aa16.09■□□□□ 0.17
CYTH3-206ENST00000478541 HAUS2Q9NVX0 235 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms