RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-208ENST00000478196 TTI2Q6NXR4 508 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 ARMCX5Q6P1M9 558 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 FUT10Q6P4F1 479 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 DCLRE1AQ6PJP8 1040 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 SLC2A7Q6PXP3 512 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 C15orf39Q6ZRI6 1047 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 STXBP4Q6ZWJ1 553 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 CD302Q8IX05 232 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 VPS52Q8N1B4 723 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 MRPL43Q8N983 215 aaKnown RBP4.28□□□□□ -1.72
RPS27A-208ENST00000478196 XXYLT1Q8NBI6 393 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 MAFAQ8NHW3 353 aaPredicted RBP4.28□□□□□ -1.72
RPS27A-208ENST00000478196 LNX1Q8TBB1 728 aaPredicted RBP4.28□□□□□ -1.72
RPS27A-208ENST00000478196 PARD3BQ8TEW8 1205 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 SLC22A17Q8WUG5 538 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 RPS6KC1Q96S38 1066 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 TSPAN18Q96SJ8 248 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 HERC2P3Q9BVR0 1158 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 COLEC11Q9BWP8 271 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 SPRTNQ9H040 489 aaPredicted RBP4.28□□□□□ -1.72
RPS27A-208ENST00000478196 EBF3Q9H4W6 596 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 SERTAD4Q9NUC0 356 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 RBAKQ9NYW8 714 aaPredicted RBP4.28□□□□□ -1.72
RPS27A-208ENST00000478196 CGNQ9P2M7 1197 aaKnown RBP4.28□□□□□ -1.72
RPS27A-208ENST00000478196 ADAM28Q9UKQ2 775 aa4.28□□□□□ -1.72
RPS27A-208ENST00000478196 UBQLN1Q9UMX0 589 aaKnown RBP4.28□□□□□ -1.72
RPS27A-208ENST00000478196 WDR87Q6ZQQ6 2873 aa4.28□□□□□ -1.73
RPS27A-208ENST00000478196 ZNF233A6NK53 670 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 LRRIQ3A6PVS8 624 aaPredicted RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PER2O15055 1255 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 MAPK13O15264 365 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 TEX28O15482 410 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 EXOC3O60645 756 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 TBX10O75333 385 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 B3GAT3O94766 335 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 OAZ2O95190 189 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CSPG5O95196 566 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 VNN1O95497 513 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 VNN2O95498 520 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CXCL14O95715 111 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 LDHAP00338 332 aaKnown RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CNPP09543 421 aaKnown RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 MTHFD1P11586 935 aaKnown RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 RPL17P18621 184 aaKnown RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 NR2F2P24468 414 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CCNE1P24864 410 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 SLC6A4P31645 630 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 NRIP1P48552 1158 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 GLUD2P49448 558 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CTXN1P60606 82 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 KRT17Q04695 432 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PIGFQ07326 219 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PTPROQ16827 1216 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 DUSP6Q16828 381 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 USP41Q3LFD5 358 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 DPCR1Q3MIW9 517 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 MIDNQ504T8 468 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PRAMEF17Q5VTA0 474 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 FAM171A1Q5VUB5 890 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PLPP4Q5VZY2 271 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PRSS55Q6UWB4 352 aaPredicted RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 TMEM184AQ6ZMB5 413 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 TMPRSS9Q7Z410 1059 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 WDR49Q8IV35 697 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 GPR65Q8IYL9 337 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 TRIML1Q8N9V2 468 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 GOLGA5Q8TBA6 731 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 ADAMTS15Q8TE58 950 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CCDC127Q96BQ5 260 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 EEF2KMTQ96G04 330 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 DHTKD1Q96HY7 919 aaPredicted RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 KLHL5Q96PQ7 755 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CGRRF1Q99675 332 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 RTP3Q9BQQ7 232 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 CLSTN3Q9BQT9 956 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 MTMR12Q9C0I1 747 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 NUP62CLQ9H1M0 184 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 SLC38A7Q9NVC3 462 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 RMND1Q9NWS8 449 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 DPP3Q9NY33 737 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 EHD3Q9NZN3 535 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 SH3BP4Q9P0V3 963 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 HOOK1Q9UJC3 728 aaKnown RBP4.27□□□□□ -1.73
RPS27A-208ENST00000478196 MAPRE3Q9UPY8 281 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 NME7Q9Y5B8 376 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 PATJQ8NI35 1801 aa4.27□□□□□ -1.73
RPS27A-208ENST00000478196 SF3B1O75533 1304 aaKnown RBP eCLIP4.26□□□□□ -1.731e-9■■■■■ 46
RPS27A-208ENST00000478196 CACNA1HO95180 2353 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 TECTAO75443 2155 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 MYO1FO00160 1098 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 SYN3O14994 580 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 CALUO43852 315 aaPredicted RBP4.26□□□□□ -1.73
RPS27A-208ENST00000478196 TADA2AO75478 443 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 ABLIM3O94929 683 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 KIF20AO95235 890 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 FAM163BP0C2L3 166 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 TRIM49P0CI25 452 aa4.26□□□□□ -1.73
RPS27A-208ENST00000478196 TRIM49CP0CI26 452 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms