RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TNFRSF8P28908 595 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ECHS1P30084 290 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 GRK5P34947 590 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 CRHR1P34998 444 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 DPP6P42658 865 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 RANBP1P43487 201 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 RABIFP47224 123 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 PIP4K2AP48426 406 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 CAMLGP49069 296 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 GZMKP49863 264 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 CLCNKAP51800 687 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 THOP1P52888 689 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MAPK10P53779 464 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 PRRX1P54821 245 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MFAP3P55082 362 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ADKP55263 362 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 HNRNPH2P55795 449 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 GSDMDP57764 484 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MGAT2Q10469 447 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 AIMP1Q12904 312 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 NOGQ13253 232 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MRPL49Q13405 166 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 KCNC3Q14003 757 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 CASP8Q14790 479 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 RRS1Q15050 365 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 PRKD1Q15139 912 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 NONOQ15233 471 aaKnown RBP eCLIP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 RPS6KA2Q15349 733 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ALX1Q15699 326 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ELAVL1Q15717 326 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 NDUFA5Q16718 116 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 LRRC23Q53EV4 343 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ZCCHC12Q6PEW1 402 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 USP17L6PQ6QN14 398 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 LINC00696Q6ZRV3 163 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 Q6ZSN1 163 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TPGS1Q6ZTW0 290 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 BBS12Q6ZW61 710 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 UBE3BQ7Z3V4 1068 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SZRD1Q7Z422 152 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 KIAA1328Q86T90 577 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC51BQ86UW2 128 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 VPS36Q86VN1 386 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 CAMK1DQ8IU85 385 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 RHPN2Q8IUC4 686 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SCN4BQ8IWT1 228 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF808Q8N4W9 903 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TDRD5Q8NAT2 981 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF680Q8NEM1 530 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 OR13C2Q8NGS9 318 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 HASPINQ8TF76 798 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 JADE3Q92613 823 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 STAMQ92783 540 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF653Q96CK0 615 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 OPTNQ96CV9 577 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MRPL38Q96DV4 380 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF512Q96ME7 567 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 CAMK1GQ96NX5 476 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 UHRF1Q96T88 793 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 NEU1Q99519 415 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ERP44Q9BS26 406 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 THUMPD3Q9BV44 507 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 STRA6Q9BX79 667 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MOV10L1Q9BXT6 1211 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 PACSIN1Q9BY11 444 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ITPAQ9BY32 194 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 B3GNT5Q9BYG0 378 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TRIM4Q9C037 500 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 IKZF4Q9H2S9 585 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 BCO1Q9HAY6 547 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 IL1RAPL2Q9NP60 686 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 FARSBQ9NSD9 589 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 WWOXQ9NZC7 414 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 COQ3Q9NZJ6 369 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SELENONQ9NZV5 590 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 VPS54Q9P1Q0 977 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 COPG2Q9UBF2 871 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MAD2L2Q9UI95 211 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 MAGED2Q9UNF1 606 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 STXBP5LQ9Y2K9 1186 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 KLHL20Q9Y2M5 609 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TSC22D4Q9Y3Q8 395 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 TESMINQ9Y4I5 508 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 SNX9Q9Y5X1 595 aa3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 ROCK2O75116 1388 aaKnown RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 IBTKQ9P2D0 1353 aaPredicted RBP3.59□□□□□ -1.83
FNDC3B-209ENST00000478016 UHRF1BP1Q6BDS2 1440 aa3.59□□□□□ -1.84
FNDC3B-209ENST00000478016 MLH3Q9UHC1 1453 aa3.59□□□□□ -1.84
FNDC3B-209ENST00000478016 SPATA31D1Q6ZQQ2 1576 aa3.59□□□□□ -1.84
FNDC3B-209ENST00000478016 MROH2AA6NES4 1674 aa3.59□□□□□ -1.84
FNDC3B-209ENST00000478016 ZNF142P52746 1687 aaPredicted RBP3.59□□□□□ -1.84
FNDC3B-209ENST00000478016 ADGBQ8N7X0 1667 aa3.59□□□□□ -1.84
FNDC3B-209ENST00000478016 ZSCAN5BA6NJL1 495 aa3.58□□□□□ -1.84
FNDC3B-209ENST00000478016 FAM171A2A8MVW0 826 aa3.58□□□□□ -1.84
FNDC3B-209ENST00000478016 H0Y8G0 127 aa3.58□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8MH3BSY2 632 aa3.58□□□□□ -1.84
FNDC3B-209ENST00000478016 GOLGA8RI6L899 631 aa3.58□□□□□ -1.84
FNDC3B-209ENST00000478016 TAF4O00268 1085 aa3.58□□□□□ -1.84
FNDC3B-209ENST00000478016 IFIT3O14879 490 aaKnown RBP3.58□□□□□ -1.84
FNDC3B-209ENST00000478016 BIRC5O15392 142 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms