RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 NCAPHQ15003 741 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 MANEALQ5VSG8 457 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 SMYD5Q6GMV2 418 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 KLHL10Q6JEL2 608 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 TAF8Q7Z7C8 310 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 FAM46DQ8NEK8 389 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 C9orf43Q8TAL5 461 aaPredicted RBP20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 CATSPER2Q96P56 530 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 CDH19Q9H159 772 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 RDH14Q9HBH5 336 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 APEX2Q9UBZ4 518 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 HPCAL4Q9UM19 191 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 BLACEA4D250 179 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 TMCC1O94876 653 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 KRT9P35527 623 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 FLT3P36888 993 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 B4GALNT1Q00973 533 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 PTK2Q05397 1052 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 RAD51Q06609 339 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 MTM1Q13496 603 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 AGERQ15109 404 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 CLPPQ16740 277 aaPredicted RBP20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 FAM102AQ5T9C2 384 aaPredicted RBP20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 SPECC1LQ69YQ0 1117 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 LEKR1Q6ZMV7 388 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 PIM3Q86V86 326 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 NLRP14Q86W24 1093 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 FAM131BQ86XD5 332 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 IL22RA1Q8N6P7 574 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 NELFBQ8WX92 580 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 OR1E3Q8WZA6 343 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 PMEPA1Q969W9 287 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 TAAR9Q96RI9 348 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 CRACR2AQ9BSW2 395 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 TTYH3Q9C0H2 523 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 MAGEH1Q9H213 219 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 RETREG1Q9H6L5 497 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 FGF22Q9HCT0 170 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 MFHAS1Q9Y4C4 1052 aa20.41■□□□□ 0.86
PDLIM1-202ENST00000477757 BICDL2A1A5D9 508 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 ZNF891A8MT65 544 aaPredicted RBP20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 IGSF6O95976 241 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 PCCBP05166 539 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 UGT1A3P35503 534 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 GABRB2P47870 512 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 KIAA1024LP59773 190 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 NRG1Q02297 640 aaPredicted RBP20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 APBA1Q02410 837 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 TRNP1Q6NT89 227 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 ZNF438Q7Z4V0 828 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 IRF2BP1Q8IU81 584 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 GDPD2Q9HCC8 539 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 PLCB1Q9NQ66 1216 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 TMEM248Q9NWD8 314 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 NEU3Q9UQ49 428 aa20.4■□□□□ 0.86
PDLIM1-202ENST00000477757 ZSCAN5CA6NGD5 496 aaPredicted RBP20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 RAMP2O60895 175 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 FGF3P11487 239 aaPredicted RBP20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 RHOQP17081 205 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 XPAP23025 273 aaPredicted RBP20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 XYLT1Q86Y38 959 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 RCBTB1Q8NDN9 531 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 OR56A4Q8NGH8 313 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 CFAP57Q96MR6 1250 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 NUDT22Q9BRQ3 303 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 DDA1Q9BW61 102 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 DPEP2Q9H4A9 486 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 DNAI1Q9UI46 699 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 CTNND2Q9UQB3 1225 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 PLAAQ9Y263 795 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 ANKRD36A6QL64 1941 aa20.39■□□□□ 0.85
PDLIM1-202ENST00000477757 IGHV5-10-1A0A0J9YXX1 117 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 TSPAN11A1L157 253 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 TMEM202A6NGA9 273 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 B4GAT1O43505 415 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 SLC9A1P19634 815 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 CDH5P33151 784 aaPredicted RBP20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 MMP12P39900 470 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 NR1D2Q14995 579 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 AMZ1Q400G9 498 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 ISM2Q6H9L7 571 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 RWDD4Q6NW29 188 aaKnown RBP20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 SLC47A2Q86VL8 602 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 CACNA2D3Q8IZS8 1091 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 CCDC112Q8NEF3 446 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 KIAA1524Q8TCG1 905 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 CASKIN2Q8WXE0 1202 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 MIB2Q96AX9 1013 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 HMCESQ96FZ2 354 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 CCDC74BQ96LY2 380 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 TMEM168Q9H0V1 697 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 PCDH12Q9NPG4 1184 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 ZNF71Q9NQZ8 489 aaPredicted RBP20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 OR12D3Q9UGF7 316 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 HOOK1Q9UJC3 728 aaKnown RBP20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 MAN1B1Q9UKM7 699 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 ATP6V1DQ9Y5K8 247 aa20.38■□□□□ 0.85
PDLIM1-202ENST00000477757 PPP1R3GB7ZBB8 358 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 CACNB4O00305 520 aaPredicted RBP20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 CAPN5O15484 640 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms