RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 POLR1BQ9H9Y6 1135 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 OSGEPQ9NPF4 335 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 RAB20Q9NX57 234 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 MBD2Q9UBB5 411 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 SLC27A5Q9Y2P5 690 aa12.76□□□□□ -0.37
RTFDC1-207ENST00000477573 A0A1W2PPM1 405 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 OR6C65A6NJZ3 312 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 FOXN3O00409 490 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 NOS1APO75052 506 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 LRRN2O75325 713 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 GZMAP12544 262 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 PTX3P26022 381 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 BNC1Q01954 994 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 TRIM32Q13049 653 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 CAPSQ13938 189 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 MGAT5BQ3V5L5 792 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 HSF5Q4G112 596 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 PRR23BQ6ZRT6 265 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM124AQ86V42 546 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 LILRA2Q8N149 483 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 KCTD4Q8WVF5 259 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 RIPOR3Q96MK2 946 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 YTHDF1Q9BYJ9 559 aaKnown RBP12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 PITHD1Q9GZP4 211 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 COPG2Q9UBF2 871 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM8A1Q9UBU6 413 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 VPS28Q9UK41 221 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 KLF2Q9Y5W3 355 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 PLXNB2O15031 1838 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 PLXNA1Q9UIW2 1896 aa12.75□□□□□ -0.37
RTFDC1-207ENST00000477573 SIP14410 1827 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 TRDMT1O14717 391 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 RAD51BO15315 384 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 MYL4P12829 197 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 JUNBP17275 347 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ETV4P43268 484 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 NDST1P52848 882 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 RAD23AP54725 363 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ATAD3CQ5T2N8 411 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 SV2AQ7L0J3 742 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 DPP9Q86TI2 863 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ARHGEF19Q8IW93 802 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 MFSD4AQ8N468 514 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ZCCHC9Q8N567 271 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 FLCNQ8NFG4 579 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 MARC2Q969Z3 335 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ARHGEF26Q96DR7 871 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 PKP2Q99959 881 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 KIFC1Q9BW19 673 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 MRPL4Q9BYD3 311 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 NAA50Q9GZZ1 169 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ABCG4Q9H172 646 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 RRAGCQ9HB90 399 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 DDX28Q9NUL7 540 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM105AQ9NUU6 356 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ACOXLQ9NUZ1 547 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 CNTN3Q9P232 1028 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 IGKV6-21A0A0C4DH24 114 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 A0A0G2JMP0 313 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 APOL1O14791 398 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 TNNI1P19237 187 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 AXLP30530 894 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 MAPK4P31152 587 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 GRIA3P42263 894 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 NPY2RP49146 381 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 CLDN10P78369 228 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 CD83Q01151 205 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 BAMBIQ13145 260 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 BRMS1LQ5PSV4 323 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 RBM20Q5T481 1227 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 SDE2Q6IQ49 451 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 TFAP2DQ7Z6R9 452 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 WDR49Q8IV35 697 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 GLYCTKQ8IVS8 523 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 FAM47BQ8NA70 645 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 POP1Q99575 1024 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 AGPAT1Q99943 283 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 SLC6A17Q9H1V8 727 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 PRDM8Q9NQV8 689 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 PDGFCQ9NRA1 345 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 ADPRHL2Q9NX46 363 aa12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 EIF3KQ9UBQ5 218 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 IPO11Q9UI26 975 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-207ENST00000477573 A0A0B4J269 797 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 CLDN3O15551 220 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 SEC14L2O76054 403 aa12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 ASS1P00966 412 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 RPS17P08708 135 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-207ENST00000477573 PCSK2P16519 638 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms