RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 SLC45A3Q96JT2 553 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 KCTD15Q96SI1 283 aaPredicted RBP13.52□□□□□ -0.25
DFFB-209ENST00000477548 CSF3RQ99062 836 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 ING2Q9H160 280 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.25
DFFB-209ENST00000477548 TSPAN16Q9UKR8 245 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 AQP12BA6NM10 295 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 JRKO75564 520 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 C7P10643 843 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 GOT1P17174 413 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 IGBP1P78318 339 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 TUBA3CQ13748 450 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 BAATQ14032 418 aaPredicted RBP13.51□□□□□ -0.25
DFFB-209ENST00000477548 SPRED1Q7Z699 444 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 AQP12AQ8IXF9 295 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 ZBED3Q96IU2 234 aaPredicted RBP13.51□□□□□ -0.25
DFFB-209ENST00000477548 C1QTNF1Q9BXJ1 281 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 SNX25Q9H3E2 840 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 KLHL3Q9UH77 587 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 RAD54BQ9Y620 910 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 ZCWPW2A0A1B0GU75 182 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 ZNF487B1APH4 448 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 MT-CO1P00395 513 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 SUPT20HL2P0C7V6 817 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 OXTRP30559 389 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 TUFMP49411 452 aaKnown RBP13.51□□□□□ -0.25
DFFB-209ENST00000477548 SLC12A1Q13621 1099 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 SPCS2Q15005 226 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 SUPT20HL1Q3ZLR7 823 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 TIGD2Q4W5G0 525 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 CNSTQ6PJW8 725 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 PIGZQ86VD9 579 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 ANKRD13BQ86YJ7 626 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 LSM14AQ8ND56 463 aaKnown RBP13.51□□□□□ -0.25
DFFB-209ENST00000477548 ADNPQ9H2P0 1102 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
DFFB-209ENST00000477548 MTF2Q9Y483 593 aaPredicted RBP13.51□□□□□ -0.25
DFFB-209ENST00000477548 CCDC78A2IDD5 438 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ACOX3O15254 700 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ARL4AP40617 200 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 NBPF12Q5TAG4 269 aaPredicted RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 IQSEC1Q6DN90 963 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 CRTC3Q6UUV7 619 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 TMEM135Q86UB9 458 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 PARVBQ9HBI1 364 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ZNF302Q9NR11 478 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ANKMY1Q9P2S6 941 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 PSME4Q14997 1843 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 TOR1BO14657 336 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 MFSD11O43934 449 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ALBP02768 609 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 S100BP04271 92 aaPredicted RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 NCAM1P13591 858 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 JUNBP17275 347 aaPredicted RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 CYP3A5P20815 502 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 HOXD10P28358 340 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 SELENBP1Q13228 472 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 CYP2U1Q7Z449 544 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 DSG4Q86SJ6 1040 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 CDR2LQ86X02 465 aaPredicted RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 SLC41A1Q8IVJ1 513 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ZNF567Q8N184 647 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 AGBL3Q8NEM8 1001 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 POMKQ9H5K3 350 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 C8orf4Q9NR00 106 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 SIX4Q9UIU6 781 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ACOT9Q9Y305 439 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 NME4O00746 187 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 NPHS1O60500 1241 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 MSCO60682 206 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 PEX10O60683 326 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ITGB3P05106 788 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 SLC35E2BP0CK96 405 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 HADHAP40939 763 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 BAG6P46379 1132 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 HNRNPFP52597 415 aaKnown RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 PLA2G16P53816 162 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 STX1BP61266 288 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ATP6V0D1P61421 351 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 SLC6A3Q01959 620 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 TRIM32Q13049 653 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ZNF460Q14592 562 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 MAPRE1Q15691 268 aaKnown RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 CYP51A1Q16850 503 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 GOLGA7BQ2TAP0 167 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ARL13BQ3SXY8 428 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 MAP1SQ66K74 1059 aaPredicted RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
DFFB-209ENST00000477548 PYROXD2Q8N2H3 581 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 NXNL1Q96CM4 212 aa13.5□□□□□ -0.25
DFFB-209ENST00000477548 MAGED4Q96JG8 741 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms