RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 OR6C4Q8NGE1 309 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 CPA5Q8WXQ8 436 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 TBC1D31Q96DN5 1066 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 PGAP3Q96FM1 320 aaPredicted RBP6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 APOOQ9BUR5 198 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 TTYH3Q9C0H2 523 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 RAB6CQ9H0N0 254 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 SLC25A18Q9H1K4 315 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 MAGEH1Q9H213 219 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 SEMA6CQ9H3T2 930 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 RDH14Q9HBH5 336 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 CYP4F12Q9HCS2 524 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 MRPL40Q9NQ50 206 aaKnown RBP6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 ANKMY1Q9P2S6 941 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 LRIT1Q9P2V4 623 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 BOD1L1Q8NFC6 3051 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF106Q9H2Y7 1883 aaKnown RBP6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 TLN1Q9Y490 2541 aaKnown RBP6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 GOLGA6CA6NDK9 693 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 GOLGA6BA6NDN3 693 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 ZSCAN5CA6NGD5 496 aaPredicted RBP6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 RHPN2P1A8MT19 583 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 A8MX80 341 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 C9orf172C9J069 976 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM72CH0Y354 149 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 STMND1H3BQB6 276 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 AREL1O15033 823 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 INSIG1O15503 277 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 TEX33O43247 280 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 CREB3O43889 395 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 PLEKP08567 350 aaPredicted RBP6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 GOLGA6DP0CG33 693 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 CYP11B1P15538 503 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 TIMP2P16035 220 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 GLB1P16278 677 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 RHOQP17081 205 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 WT1P19544 449 aaPredicted RBP6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 LIG3P49916 1009 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 PEX5P50542 639 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 POLE2P56282 527 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 SRSF1Q07955 248 aaKnown RBP eCLIP6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 KCNAB2Q13303 367 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 C16orf72Q14CZ0 275 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 WSCD2Q2TBF2 565 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 C14orf28Q4W4Y0 310 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 HSP90AA4PQ58FG1 418 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 CERCAMQ5T4B2 595 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM72AQ5TYM5 149 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 DENND2CQ68D51 928 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 SPECC1LQ69YQ0 1117 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM72DQ6L9T8 149 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 TRNP1Q6NT89 227 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 SCYL2Q6P3W7 929 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 BORAQ6PGQ7 559 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 SPRED1Q7Z699 444 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 PIM3Q86V86 326 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM72BQ86X60 149 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 IRF2BP1Q8IU81 584 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 LURAP1LQ8IV03 231 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 PLPP6Q8IY26 295 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 NRSN1Q8IZ57 195 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 CCDC185Q8N715 623 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 OR56A4Q8NGH8 313 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 HTR3CQ8WXA8 447 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 NT5C3BQ969T7 300 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM159Q96B96 161 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 HMCESQ96FZ2 354 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 FUCA2Q9BTY2 467 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 MAGEB5Q9BZ81 275 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 PCDH12Q9NPG4 1184 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM248Q9NWD8 314 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 GOLGA6AQ9NYA3 693 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 PPARGC1AQ9UBK2 798 aaKnown RBP6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF212Q9UDV6 495 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 DAAM1Q9Y4D1 1078 aa6.73□□□□□ -1.33
RTFDC1-206ENST00000477485 A0A1W2PQC6 194 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 GTPBP10A4D1E9 387 aaKnown RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM202A6NGA9 273 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 ZW10O43264 779 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 KDELR3O43731 214 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 LRIG2O94898 1065 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CPNE6O95741 557 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 NTRK1P04629 796 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 MMEP08473 750 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 ELFN1P0C7U0 828 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 PRKAR1AP10644 381 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CCL4P13236 92 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 KELP23276 732 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 MPSTP25325 297 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CD82P27701 267 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 EPHB2P29323 1055 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 ADRA1BP35368 520 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 SCNN1AP37088 669 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 CCR10P46092 362 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 GABRB2P47870 512 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 MAZP56270 477 aaKnown RBP6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 OR1D5P58170 312 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 MTM1Q13496 603 aa6.72□□□□□ -1.33
RTFDC1-206ENST00000477485 UBAP2LQ14157 1087 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms