RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SLC35F3Q8IY50 421 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 ZCCHC9Q8N567 271 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 PPHLN1Q8NEY8 458 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 OR14A16Q8NHC5 309 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 ADAMTS14Q8WXS8 1223 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 TRIB2Q92519 343 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 MIB2Q96AX9 1013 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 C7orf26Q96N11 449 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 RANBP17Q9H2T7 1088 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 DDX4Q9NQI0 724 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 OLA1Q9NTK5 396 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 OR6C3Q9NZP0 311 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 ORC3Q9UBD5 711 aaPredicted RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 PCDHA7Q9UN72 937 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 PAM16Q9Y3D7 125 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 CAPN7Q9Y6W3 813 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 CACNA1IQ9P0X4 2223 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 EIF3CLB5ME19 914 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 USP17L23D6RBM5 183 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 J3KR12 359 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SEC14L2O76054 403 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 TMEM63AO94886 807 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SOX30O94993 753 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 NDUFB4O95168 129 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 ALPLP05186 524 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 CLEC3BP05452 202 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 HSPA1AP0DMV8 641 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 HSPA1BP0DMV9 641 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SNHG28P0DPA3 235 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 CHATP28329 748 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 ICAM3P32942 547 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SHMT1P34896 483 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 MLH1P40692 756 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 GEMIN4P57678 1058 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 RPS3AP61247 264 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 RPL7AP62424 266 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 ADORA2A-AS1P86434 159 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 KRT32Q14532 448 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SHBQ15464 509 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 ALG11Q2TAA5 492 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 COL28A1Q2UY09 1125 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 MMEL1Q495T6 779 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 FBXO46Q6PJ61 603 aaPredicted RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SHFQ7M4L6 423 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 FJX1Q86VR8 437 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 ETNPPLQ8TBG4 499 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 HDAC2Q92769 488 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SNAPC3Q92966 411 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 GTF3C6Q969F1 213 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SMARCE1Q969G3 411 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 ZNF570Q96NI8 536 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 TKTL2Q9H0I9 626 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 PRKRIP1Q9H875 184 aaPredicted RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 BRF2Q9HAW0 419 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 MAGEE1Q9HCI5 957 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 SLC6A13Q9NSD5 602 aa3.43□□□□□ -1.86
TARDBP-208ENST00000477447 INTS6Q9UL03 887 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 AAR2Q9Y312 384 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 LSM4Q9Y4Z0 139 aaKnown RBP3.43□□□□□ -1.86
TARDBP-208ENST00000477447 A0A1B0GVM2 712 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 DYTNA2CJ06 578 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 LINC01553A4QN01 128 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 INSIG1O15503 277 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 TGFB1I1O43294 461 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 SEC14L5O43304 696 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 CH25HO95992 272 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 MMP2P08253 660 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 HOXC6P09630 235 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 KRT10P13645 584 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 AGAP20933 346 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 CDAP32320 146 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 BSGP35613 385 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 PBX3P40426 434 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 CDKN2AP42771 156 aaKnown RBP3.42□□□□□ -1.86
TARDBP-208ENST00000477447 MXI1P50539 228 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 OLR1P78380 273 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 SORDQ00796 357 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 CRYZQ08257 329 aaKnown RBP3.42□□□□□ -1.86
TARDBP-208ENST00000477447 Q0VFX4 171 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 TMEM115Q12893 351 aaPredicted RBP3.42□□□□□ -1.86
TARDBP-208ENST00000477447 FHL1Q13642 323 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 FGFBP1Q14512 234 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 TDRD12Q587J7 1177 aaKnown RBP3.42□□□□□ -1.86
TARDBP-208ENST00000477447 CCDC30Q5VVM6 783 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 HIST2H2BCQ6DN03 193 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 HIST2H2BDQ6DRA6 164 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 TSSK4Q6SA08 328 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 QSOX2Q6ZRP7 698 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 CCDC129Q6ZRS4 1044 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 TMTC3Q6ZXV5 915 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 AADATQ8N5Z0 425 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 ZBTB2Q8N680 514 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 SCCPDHQ8NBX0 429 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 NEXN-AS1Q8NBZ9 246 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 BEST2Q8NFU1 509 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 B4GALNT2Q8NHY0 566 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 HUS1BQ8NHY5 278 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 SKA1Q96BD8 255 aa3.42□□□□□ -1.86
TARDBP-208ENST00000477447 INTS12Q96CB8 462 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms