RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 NPWQ8N729 165 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 ANKRD20A12PQ8NF67 263 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 BTN2A2Q8WVV5 523 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 PRR11Q96HE9 360 aaPredicted RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 ZNF578Q96N58 590 aaPredicted RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 SYT11Q9BT88 431 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 CPEB1Q9BZB8 566 aaKnown RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 RETREG1Q9H6L5 497 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 USP29Q9HBJ7 922 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 MRPL40Q9NQ50 206 aaKnown RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 ANO10Q9NW15 660 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 PADI4Q9UM07 663 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 DOLKQ9UPQ8 538 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 LRRC10BA6NIK2 292 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
VARS2-208ENST00000477052 TPP1O14773 563 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 DAPK3O43293 454 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
VARS2-208ENST00000477052 CTSEP14091 401 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 FERP16591 822 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 MMP12P39900 470 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 HK3P52790 923 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 YPEL5P62699 121 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 PTPRRQ15256 657 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 PPP6R3Q5H9R7 873 aaPredicted RBP11.75□□□□□ -0.53
VARS2-208ENST00000477052 CFAP58Q5T655 872 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 SRLQ86TD4 932 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 ZSCAN30Q86W11 494 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 PAF1Q8N7H5 531 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 Q8N9G6 341 aaPredicted RBP11.75□□□□□ -0.53
VARS2-208ENST00000477052 CASKIN2Q8WXE0 1202 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 CCDC74AQ96AQ1 378 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 PDXPQ96GD0 296 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 C1QTNF7Q9BXJ2 289 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 SUDS3Q9H7L9 328 aaPredicted RBP11.75□□□□□ -0.53
VARS2-208ENST00000477052 EVA1BQ9NVM1 165 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 GPR34Q9UPC5 381 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 ANKRD36A6QL64 1941 aa11.75□□□□□ -0.53
VARS2-208ENST00000477052 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 TMEM202A6NGA9 273 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 LRRC53A6NM62 1247 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 FGF10O15520 208 aaPredicted RBP11.74□□□□□ -0.53
VARS2-208ENST00000477052 PALMO75781 387 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 DXOO77932 396 aaKnown RBP11.74□□□□□ -0.53
VARS2-208ENST00000477052 TNFSF15O95150 251 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 SKILP12757 684 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 HGFP14210 728 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 TCF4P15884 667 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 ERCC2P18074 760 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 RBMS1P29558 406 aaKnown RBP11.74□□□□□ -0.53
VARS2-208ENST00000477052 MIPP30301 263 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 RPIAP49247 311 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 SRP54P61011 504 aaKnown RBP11.74□□□□□ -0.53
VARS2-208ENST00000477052 CCL7P80098 99 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 TYRO3Q06418 890 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 ELP6Q0PNE2 266 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 C19orf57Q0VDD7 668 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 RALGDSQ12967 914 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 NFATC4Q14934 902 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 ESRP1Q6NXG1 681 aaKnown RBP11.74□□□□□ -0.53
VARS2-208ENST00000477052 ERAP2Q6P179 960 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 RFX8Q6ZV50 586 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 CYP4V2Q6ZWL3 525 aaPredicted RBP11.74□□□□□ -0.53
VARS2-208ENST00000477052 ZNF571Q7Z3V5 609 aaPredicted RBP11.74□□□□□ -0.53
VARS2-208ENST00000477052 LSMEM2Q8N112 164 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 SDR16C5Q8N3Y7 309 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 ZNF843Q8N446 348 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 CCL4L1Q8NHW4 92 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 OR1E3Q8WZA6 343 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 GLMNQ92990 594 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 SLC46A1Q96NT5 459 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 LGR4Q9BXB1 951 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 EDEM3Q9BZQ6 932 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 SEMA4CQ9C0C4 833 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 HAUS4Q9H6D7 363 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 SP110Q9HB58 689 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 THSD1Q9NS62 852 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 NCKIPSDQ9NZQ3 722 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 MYO1AQ9UBC5 1043 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 KLQ9UEF7 1012 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
VARS2-208ENST00000477052 ATMQ13315 3056 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 A0A0U1RQS6 177 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 TMEM191CA6NGB0 347 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 ARHGAP42A6NI28 874 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 LRP4O75096 1905 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 RECQL5O94762 991 aaPredicted RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 RASGRP1O95267 797 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 FTLP02792 175 aaPredicted RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 RPLP0P05388 317 aaKnown RBP11.73□□□□□ -0.53
VARS2-208ENST00000477052 GM2AP17900 193 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 SCNN1BP51168 640 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 NDST2P52849 883 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 TMPRSS3P57727 454 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 ERVPABLB-1P60509 514 aa11.73□□□□□ -0.53
VARS2-208ENST00000477052 SPIDRQ14159 915 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms