RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CLEC17AQ6ZS10 378 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 PIP4P1Q86T03 277 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 DENND6AQ8IWF6 608 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 NTN5Q8WTR8 489 aaPredicted RBP6.18□□□□□ -1.42
VPS50-212ENST00000476413 POMGNT1Q8WZA1 660 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 PPP1R13BQ96KQ4 1090 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 SIN3AQ96ST3 1273 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 MSTO1Q9BUK6 570 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 NPFFR1Q9GZQ6 430 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 CDT1Q9H211 546 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 ANKRD10Q9NXR5 420 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 RAI2Q9Y5P3 530 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 SNX8Q9Y5X2 465 aa6.18□□□□□ -1.42
VPS50-212ENST00000476413 FAM237AA0A1B0GTK4 181 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 TYW5A2RUC4 315 aaKnown RBP6.17□□□□□ -1.42
VPS50-212ENST00000476413 KCNU1A8MYU2 1149 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 STMND1H3BQB6 276 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 MDM4O15151 490 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 HNRNPCL1O60812 293 aaKnown RBP6.17□□□□□ -1.42
VPS50-212ENST00000476413 ADRB2P07550 413 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 PRR35P0CG20 571 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 MCM3P25205 808 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 PRAMEP78395 509 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 CRYMQ14894 314 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 ASTE1Q2TB18 679 aaPredicted RBP6.17□□□□□ -1.42
VPS50-212ENST00000476413 Q4G0T1 1027 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 RAB41Q5JT25 222 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 EPHA10Q5JZY3 1008 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 C10orf25Q5T742 122 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 JADE1Q6IE81 842 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 TMEM154Q6P9G4 183 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 FBXO46Q6PJ61 603 aaPredicted RBP6.17□□□□□ -1.42
VPS50-212ENST00000476413 ANKRD13BQ86YJ7 626 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 PARP16Q8N5Y8 322 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 TEX45Q8NA69 505 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 ENGASEQ8NFI3 743 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 COQ8BQ96D53 544 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 ZC3HAV1LQ96H79 300 aaKnown RBP6.17□□□□□ -1.42
VPS50-212ENST00000476413 ZNF333Q96JL9 665 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 MAGEE1Q9HCI5 957 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 AAR2Q9Y312 384 aaKnown RBP6.17□□□□□ -1.42
VPS50-212ENST00000476413 UTYO14607 1347 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 ZMYM2Q9UBW7 1377 aa6.17□□□□□ -1.42
VPS50-212ENST00000476413 A0A1W2PQ09 198 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 PLOD3O60568 738 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 TSPAN9O75954 239 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 NKX2-2O95096 273 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 STARD3NLO95772 234 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 IFNA2P01563 188 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 MMP3P08254 477 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 FGF2P09038 288 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 ETFAP13804 333 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 ENO3P13929 434 aaPredicted RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 IL7RP16871 459 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 SNX16P57768 344 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 IFI35P80217 286 aaPredicted RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 SRSF1Q07955 248 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS50-212ENST00000476413 AIMP2Q13155 320 aaKnown RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 DRAP1Q14919 205 aaPredicted RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 INPP5JQ15735 1006 aaPredicted RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 DUSP6Q16828 381 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 TCTN1Q2MV58 587 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 NCAPH2Q6IBW4 605 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 KIAA0930Q6ICG6 404 aaPredicted RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 HEPHL1Q6MZM0 1159 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 CES5AQ6NT32 575 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 GLDNQ6ZMI3 551 aaPredicted RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 TRILQ7L0X0 811 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 ZCCHC9Q8N567 271 aaKnown RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 BICD2Q8TD16 824 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 GPT2Q8TD30 523 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 TMEM18Q96B42 140 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 ARHGEF26Q96DR7 871 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 CALML4Q96GE6 196 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 MRIQ9BWK5 157 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 SH2D4AQ9H788 454 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 SUCLA2Q9P2R7 463 aaPredicted RBP6.16□□□□□ -1.42
VPS50-212ENST00000476413 COG5Q9UP83 839 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 PASKQ96RG2 1323 aa6.16□□□□□ -1.42
VPS50-212ENST00000476413 CDRT15L2A8MXV6 281 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 B4DLN1 442 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 ERAL1O75616 437 aaKnown RBP6.15□□□□□ -1.42
VPS50-212ENST00000476413 BEST1O76090 585 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 CLTBP09497 229 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 KRT10P13645 584 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 CHRNB2P17787 502 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 AVPR1AP37288 418 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 CLCN3P51790 818 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 SSBP2P81877 361 aaPredicted RBP6.15□□□□□ -1.42
VPS50-212ENST00000476413 STK4Q13043 487 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 CFAP58Q5T655 872 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 NUGGCQ68CJ6 796 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 C17orf53Q8N3J3 647 aaPredicted RBP6.15□□□□□ -1.42
VPS50-212ENST00000476413 HUS1BQ8NHY5 278 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 TMEM174Q8WUU8 243 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 ZKSCAN4Q969J2 545 aaPredicted RBP6.15□□□□□ -1.42
VPS50-212ENST00000476413 FBXL8Q96CD0 374 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 ZFYVE19Q96K21 471 aa6.15□□□□□ -1.42
VPS50-212ENST00000476413 BPIFA1Q9NP55 256 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms